RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 CLCNKBP51801 687 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 PTPAQ15257 358 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 USP41Q3LFD5 358 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 ATAT1Q5SQI0 421 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 TRIM67Q6ZTA4 783 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 BRAPQ7Z569 592 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 GPR149Q86SP6 731 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 PPFIBP1Q86W92 1011 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 C3orf58Q8NDZ4 430 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 TMEM161BQ8NDZ6 487 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 ST13P5Q8NFI4 369 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-214ENST00000574003 EPSTI1Q96J88 318 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 RIPOR3Q96MK2 946 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 ZMAT2Q96NC0 199 aaKnown RBP12.43□□□□□ -0.42
RPAIN-214ENST00000574003 PPP1R10Q96QC0 940 aaKnown RBP12.43□□□□□ -0.42
RPAIN-214ENST00000574003 TCHPQ9BT92 498 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 MRPL4Q9BYD3 311 aaKnown RBP12.43□□□□□ -0.42
RPAIN-214ENST00000574003 HAPLN2Q9GZV7 340 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 SFXN1Q9H9B4 322 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 ANKFY1Q9P2R3 1169 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 LIMD1Q9UGP4 676 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 ZMYM2Q9UBW7 1377 aa12.43□□□□□ -0.42
RPAIN-214ENST00000574003 CITO14578 2027 aa12.42□□□□□ -0.42
RPAIN-214ENST00000574003 SMIM28A0A1B0GU29 152 aa12.42□□□□□ -0.42
RPAIN-214ENST00000574003 TGM5O43548 720 aa12.42□□□□□ -0.42
RPAIN-214ENST00000574003 PDGFBP01127 241 aaPredicted RBP12.42□□□□□ -0.42
RPAIN-214ENST00000574003 ADH1AP07327 375 aa12.42□□□□□ -0.42
RPAIN-214ENST00000574003 MAPTP10636 758 aaKnown RBP12.42□□□□□ -0.42
RPAIN-214ENST00000574003 PROZP22891 400 aa12.42□□□□□ -0.42
RPAIN-214ENST00000574003 UBA7P41226 1012 aa12.42□□□□□ -0.42
RPAIN-214ENST00000574003 GRM5P41594 1212 aa12.42□□□□□ -0.42
RPAIN-214ENST00000574003 BRCC3P46736 316 aa12.42□□□□□ -0.42
RPAIN-214ENST00000574003 SPAG1Q07617 926 aa12.42□□□□□ -0.42
RPAIN-214ENST00000574003 PTPN21Q16825 1174 aa12.42□□□□□ -0.42
RPAIN-214ENST00000574003 C18orf25Q96B23 403 aaPredicted RBP12.42□□□□□ -0.42
RPAIN-214ENST00000574003 CLIC6Q96NY7 704 aa12.42□□□□□ -0.42
RPAIN-214ENST00000574003 NECTIN4Q96NY8 510 aa12.42□□□□□ -0.42
RPAIN-214ENST00000574003 REEP2Q9BRK0 252 aa12.42□□□□□ -0.42
RPAIN-214ENST00000574003 NT5C3AQ9H0P0 336 aa12.42□□□□□ -0.42
RPAIN-214ENST00000574003 MTMR6Q9Y217 621 aa12.42□□□□□ -0.42
RPAIN-214ENST00000574003 HCN4Q9Y3Q4 1203 aa12.42□□□□□ -0.42
RPAIN-214ENST00000574003 MTCL1Q9Y4B5 1905 aaKnown RBP12.42□□□□□ -0.42
RPAIN-214ENST00000574003 DENND4AQ7Z401 1863 aa12.42□□□□□ -0.42
RPAIN-214ENST00000574003 SF3B1O75533 1304 aaKnown RBP eCLIP12.41□□□□□ -0.42
RPAIN-214ENST00000574003 CCDC195A0A1B0GUA6 201 aa12.41□□□□□ -0.42
RPAIN-214ENST00000574003 N4BP1O75113 896 aaKnown RBP12.41□□□□□ -0.42
RPAIN-214ENST00000574003 ZBTB41Q5SVQ8 909 aa12.41□□□□□ -0.42
RPAIN-214ENST00000574003 FOXD4L5Q5VV16 416 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-214ENST00000574003 MPZL3Q6UWV2 235 aa12.41□□□□□ -0.42
RPAIN-214ENST00000574003 ALKAL1Q6UXT8 129 aa12.41□□□□□ -0.42
RPAIN-214ENST00000574003 RSPO2Q6UXX9 243 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-214ENST00000574003 KREMEN2Q8NCW0 462 aa12.41□□□□□ -0.42
RPAIN-214ENST00000574003 RASSF8Q8NHQ8 419 aa12.41□□□□□ -0.42
RPAIN-214ENST00000574003 LNX1Q8TBB1 728 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-214ENST00000574003 SPIRE2Q8WWL2 714 aa12.41□□□□□ -0.42
RPAIN-214ENST00000574003 FOXD4L4Q8WXT5 416 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-214ENST00000574003 RAD54LQ92698 747 aa12.41□□□□□ -0.42
RPAIN-214ENST00000574003 ZNF707Q96C28 371 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-214ENST00000574003 CALML4Q96GE6 196 aa12.41□□□□□ -0.42
RPAIN-214ENST00000574003 SNX27Q96L92 541 aa12.41□□□□□ -0.42
RPAIN-214ENST00000574003 CLSTN3Q9BQT9 956 aa12.41□□□□□ -0.42
RPAIN-214ENST00000574003 TTPALQ9BTX7 342 aa12.41□□□□□ -0.42
RPAIN-214ENST00000574003 CCDC94Q9BW85 323 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-214ENST00000574003 ZHX3Q9H4I2 956 aa12.41□□□□□ -0.42
RPAIN-214ENST00000574003 STK39Q9UEW8 545 aa12.41□□□□□ -0.42
RPAIN-214ENST00000574003 SSX2IPQ9Y2D8 614 aa12.41□□□□□ -0.42
RPAIN-214ENST00000574003 NR2E1Q9Y466 385 aa12.41□□□□□ -0.42
RPAIN-214ENST00000574003 DOCK8Q8NF50 2099 aa12.41□□□□□ -0.42
RPAIN-214ENST00000574003 B3GAT3O94766 335 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 BRD1O95696 1058 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 MCF2P10911 925 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 TKTP29401 623 aaKnown RBP12.4□□□□□ -0.42
RPAIN-214ENST00000574003 LONP1P36776 959 aaKnown RBP12.4□□□□□ -0.42
RPAIN-214ENST00000574003 TNFSF9P41273 254 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 MATR3P43243 847 aaKnown RBP eCLIP12.4□□□□□ -0.42
RPAIN-214ENST00000574003 YARSP54577 528 aaKnown RBP12.4□□□□□ -0.42
RPAIN-214ENST00000574003 STRN3Q13033 797 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 PSMD5Q16401 504 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 UPP1Q16831 310 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 SLC10A6Q3KNW5 377 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 XKR4Q5GH76 650 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 LILRA6Q6PI73 481 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 CCDC149Q6ZUS6 474 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 HAUS6Q7Z4H7 955 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 MYCT1Q8N699 235 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 TDRD5Q8NAT2 981 aaKnown RBP12.4□□□□□ -0.42
RPAIN-214ENST00000574003 SMG7Q92540 1137 aaKnown RBP12.4□□□□□ -0.42
RPAIN-214ENST00000574003 ASIC4Q96FT7 647 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 AK8Q96MA6 479 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 ACAP3Q96P50 834 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 USP28Q96RU2 1077 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 NTPCRQ9BSD7 190 aaKnown RBP12.4□□□□□ -0.42
RPAIN-214ENST00000574003 TIPINQ9BVW5 301 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 IKZF4Q9H2S9 585 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 C17orf75Q9HAS0 396 aa12.4□□□□□ -0.42
RPAIN-214ENST00000574003 FBXO2Q9UK22 296 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-214ENST00000574003 RBM19Q9Y4C8 960 aaKnown RBP12.4□□□□□ -0.42
RPAIN-214ENST00000574003 TISP43B9A030 160 aa12.39□□□□□ -0.43
RPAIN-214ENST00000574003 K7ELQ4 463 aaPredicted RBP12.39□□□□□ -0.43
RPAIN-214ENST00000574003 K7ENM7 598 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms