RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 DNAJC17Q9NVM6 304 aaKnown RBP16.72■□□□□ 0.27
NUP88-207ENST00000573584 HERC5Q9UII4 1024 aaKnown RBP16.72■□□□□ 0.27
NUP88-207ENST00000573584 TTC4O95801 387 aa16.72■□□□□ 0.27
NUP88-207ENST00000573584 OAS1P00973 400 aaKnown RBP16.72■□□□□ 0.27
NUP88-207ENST00000573584 QARSP47897 775 aaKnown RBP16.72■□□□□ 0.27
NUP88-207ENST00000573584 KYNUQ16719 465 aa16.72■□□□□ 0.27
NUP88-207ENST00000573584 VSTM1Q6UX27 236 aa16.72■□□□□ 0.27
NUP88-207ENST00000573584 SAAL1Q96ER3 474 aa16.72■□□□□ 0.27
NUP88-207ENST00000573584 SNF8Q96H20 258 aa16.72■□□□□ 0.27
NUP88-207ENST00000573584 CTNNAL1Q9UBT7 734 aa16.72■□□□□ 0.27
NUP88-207ENST00000573584 ANAPC7Q9UJX3 599 aa16.72■□□□□ 0.27
NUP88-207ENST00000573584 NRXN2Q9P2S2 1712 aa16.72■□□□□ 0.27
NUP88-207ENST00000573584 TMEM150BA6NC51 233 aa16.71■□□□□ 0.27
NUP88-207ENST00000573584 FOXO6A8MYZ6 492 aa16.71■□□□□ 0.27
NUP88-207ENST00000573584 SUN1O94901 812 aa16.71■□□□□ 0.27
NUP88-207ENST00000573584 MAPK4P31152 587 aa16.71■□□□□ 0.27
NUP88-207ENST00000573584 SEPT12Q8IYM1 358 aa16.71■□□□□ 0.27
NUP88-207ENST00000573584 ELMO3Q96BJ8 720 aa16.71■□□□□ 0.27
NUP88-207ENST00000573584 IWS1Q96ST2 819 aa16.71■□□□□ 0.27
NUP88-207ENST00000573584 FBXO28Q9NVF7 368 aa16.71■□□□□ 0.27
NUP88-207ENST00000573584 RBBP6Q7Z6E9 1792 aaKnown RBP16.71■□□□□ 0.27
NUP88-207ENST00000573584 DHX15O43143 795 aaKnown RBP16.71■□□□□ 0.27
NUP88-207ENST00000573584 ADSSP30520 456 aa16.71■□□□□ 0.27
NUP88-207ENST00000573584 ITGA8P53708 1063 aa16.71■□□□□ 0.27
NUP88-207ENST00000573584 SNRPFP62306 86 aaKnown RBP16.71■□□□□ 0.27
NUP88-207ENST00000573584 DDX1Q92499 740 aaKnown RBP16.71■□□□□ 0.27
NUP88-207ENST00000573584 DHX38Q92620 1227 aaKnown RBP16.71■□□□□ 0.27
NUP88-207ENST00000573584 NT5C1BQ96P26 610 aa16.71■□□□□ 0.27
NUP88-207ENST00000573584 ST6GALNAC4Q9H4F1 302 aa16.71■□□□□ 0.27
NUP88-207ENST00000573584 TCP10L2B9ZVM9 353 aa16.7■□□□□ 0.26
NUP88-207ENST00000573584 THAP12O43422 761 aa16.7■□□□□ 0.26
NUP88-207ENST00000573584 GRIN3BO60391 1043 aa16.7■□□□□ 0.26
NUP88-207ENST00000573584 IVDP26440 423 aa16.7■□□□□ 0.26
NUP88-207ENST00000573584 YWHABP31946 246 aaKnown RBP16.7■□□□□ 0.26
NUP88-207ENST00000573584 NLGN1Q8N2Q7 840 aa16.7■□□□□ 0.26
NUP88-207ENST00000573584 PARD3BQ8TEW8 1205 aa16.7■□□□□ 0.26
NUP88-207ENST00000573584 ZNF219Q9P2Y4 722 aaPredicted RBP16.7■□□□□ 0.26
NUP88-207ENST00000573584 LTBP4Q8N2S1 1624 aa16.7■□□□□ 0.26
NUP88-207ENST00000573584 ANKRD31Q8N7Z5 1873 aa16.7■□□□□ 0.26
NUP88-207ENST00000573584 GAS8O95995 478 aa16.7■□□□□ 0.26
NUP88-207ENST00000573584 ADCY8P40145 1251 aa16.7■□□□□ 0.26
NUP88-207ENST00000573584 GPC3P51654 580 aa16.7■□□□□ 0.26
NUP88-207ENST00000573584 RIPK1Q13546 671 aa16.7■□□□□ 0.26
NUP88-207ENST00000573584 GDAP1Q8TB36 358 aa16.7■□□□□ 0.26
NUP88-207ENST00000573584 TAS1R2Q8TE23 839 aa16.7■□□□□ 0.26
NUP88-207ENST00000573584 VEZTQ9HBM0 779 aa16.7■□□□□ 0.26
NUP88-207ENST00000573584 TMEM8AQ9HCN3 771 aa16.7■□□□□ 0.26
NUP88-207ENST00000573584 KRT5P13647 590 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 BRAFP15056 766 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 SCP2P22307 547 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 KCNJ2P63252 427 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 CRELD2Q6UXH1 353 aaPredicted RBP16.69■□□□□ 0.26
NUP88-207ENST00000573584 FBXL13Q8NEE6 735 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 IL31RAQ8NI17 732 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 AGBL1Q96MI9 1066 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 TRIM7Q9C029 511 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 ECT2Q9H8V3 914 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 ATP6V0A4Q9HBG4 840 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 RAB20Q9NX57 234 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.69■□□□□ 0.26
NUP88-207ENST00000573584 ANAPC5Q9UJX4 755 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 COQ4Q9Y3A0 265 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 CALCAP01258 141 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 ATF2P15336 505 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 MAN1A1P33908 653 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 VPS41P49754 854 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 NCALDP61601 193 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 PTK6Q13882 451 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 MPP2Q14168 576 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 ZNF268Q14587 947 aaPredicted RBP16.69■□□□□ 0.26
NUP88-207ENST00000573584 CLEC16AQ2KHT3 1053 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 FAM102BQ5T8I3 360 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 SYDE1Q6ZW31 735 aaPredicted RBP16.69■□□□□ 0.26
NUP88-207ENST00000573584 GBP7Q8N8V2 638 aaPredicted RBP16.69■□□□□ 0.26
NUP88-207ENST00000573584 GRK7Q8WTQ7 553 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 MAIP1Q8WWC4 291 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 CKAP2Q8WWK9 683 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 TOPORSQ9NS56 1045 aaPredicted RBP16.69■□□□□ 0.26
NUP88-207ENST00000573584 COL20A1Q9P218 1284 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 GH1P01241 217 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 NQO1P15559 274 aaKnown RBP16.69■□□□□ 0.26
NUP88-207ENST00000573584 CNGA1P29973 690 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 NCKAP1LP55160 1127 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 GALNTL6Q49A17 601 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 SPATA21Q7Z572 469 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 PHLDB2Q86SQ0 1253 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 FAM160B2Q86V87 743 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 PWWP2AQ96N64 755 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 HERPUD2Q9BSE4 406 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 TRAIPQ9BWF2 469 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 AGO4Q9HCK5 861 aaKnown RBP16.69■□□□□ 0.26
NUP88-207ENST00000573584 TBK1Q9UHD2 729 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 EXOC7Q9UPT5 735 aa16.69■□□□□ 0.26
NUP88-207ENST00000573584 HSD17B4P51659 736 aa16.68■□□□□ 0.26
NUP88-207ENST00000573584 CAV1Q03135 178 aa16.68■□□□□ 0.26
NUP88-207ENST00000573584 SPP2Q13103 211 aa16.68■□□□□ 0.26
NUP88-207ENST00000573584 ATL2Q8NHH9 583 aa16.68■□□□□ 0.26
NUP88-207ENST00000573584 DCLK3Q9C098 648 aa16.68■□□□□ 0.26
NUP88-207ENST00000573584 CCPG1Q9ULG6 757 aa16.68■□□□□ 0.26
NUP88-207ENST00000573584 TBX20Q9UMR3 447 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms