RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 CASP5P51878 434 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 GTF2BQ00403 316 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 MCL1Q07820 350 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 KCNA1Q09470 495 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 TUSC3Q13454 348 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 PTPN14Q15678 1187 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 SLC10A6Q3KNW5 377 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 KIAA0319Q5VV43 1072 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 SYCE2Q6PIF2 218 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 ZPBP2Q6X784 338 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 TMEM184AQ6ZMB5 413 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 ZNF720Q7Z2F6 126 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 FAM178BQ8IXR5 827 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 SLC22A17Q8WUG5 538 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 KHSRPQ92945 711 aaKnown RBP eCLIP11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 PPP2R3CQ969Q6 453 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 ACAP3Q96P50 834 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 KLHL5Q96PQ7 755 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 HERC2P3Q9BVR0 1158 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 COLEC11Q9BWP8 271 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 STRA6Q9BX79 667 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 S1PR5Q9H228 398 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 ANKFY1Q9P2R3 1169 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 KCNG1Q9UIX4 513 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 CD207Q9UJ71 328 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 CDH22Q9UJ99 828 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 IRAK3Q9Y616 596 aa11.21□□□□□ -0.61
GTF3C1-213ENST00000571886 PLXNA3P51805 1871 aa11.21□□□□□ -0.62
GTF3C1-213ENST00000571886 FAM189A1O60320 539 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 TBCAO75347 108 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 PPP1R37O75864 691 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 KIF4AO95239 1232 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 PIGRP01833 764 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 SOD2P04179 222 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 CNPP09543 421 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 MYBP10242 640 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 IDEP14735 1019 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 EPCAMP16422 314 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 ME1P48163 572 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 SPAG1Q07617 926 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 NOLC1Q14978 699 aaKnown RBP eCLIP11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 RESP18Q5W5W9 173 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 FUT10Q6P4F1 479 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 C12orf76Q8N812 135 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 C3orf58Q8NDZ4 430 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 GLIS3Q8NEA6 775 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 KCNG4Q8TDN1 519 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 HPS3Q969F9 1004 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 C18orf25Q96B23 403 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 BICD1Q96G01 975 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 SNX27Q96L92 541 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 CDCA3Q99618 268 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 CCDC94Q9BW85 323 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 CHST7Q9NS84 486 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 KBTBD4Q9NVX7 518 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 ADAM28Q9UKQ2 775 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 CFAP45Q9UL16 551 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 HCFC2Q9Y5Z7 792 aa11.2□□□□□ -0.62
GTF3C1-213ENST00000571886 ANK1P16157 1881 aa11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 FRMD3A2A2Y4 597 aa11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 POLR2DO15514 142 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 CLDN3O15551 220 aa11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 TADA2AO75478 443 aa11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 CXCL8P10145 99 aa11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 MATR3P43243 847 aaKnown RBP eCLIP11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 LIG4P49917 911 aa11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 CLCNKBP51801 687 aa11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 COASYQ13057 564 aa11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 HSP90AA2PQ14568 343 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 ATL3Q6DD88 541 aa11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 ANKRD54Q6NXT1 300 aa11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 MAP4K3Q8IVH8 894 aa11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 SMRP1Q8NCR6 262 aa11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 ZSWIM2Q8NEG5 633 aa11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 LEO1Q8WVC0 666 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 ST6GALNAC4Q9H4F1 302 aa11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 PANK4Q9NVE7 773 aa11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 TTC28Q96AY4 2481 aa11.19□□□□□ -0.62
GTF3C1-213ENST00000571886 MTCL1Q9Y4B5 1905 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 A0A0B4J269 797 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 A0A1B0GVL5 298 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 CARNS1A5YM72 827 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 LACTBL1A8MY62 500 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 H0YCG3 227 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 I3L4J1 428 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 TNFRSF10AO00220 468 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 PRPF6O94906 941 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 WEE2P0C1S8 567 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 KCNE1P15382 129 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 RPL17P18621 184 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 ADSSP30520 456 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 BRCC3P46736 316 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 GLUD2P49448 558 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 YARSP54577 528 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 DSG1Q02413 1049 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 SMAD4Q13485 552 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 SMAD2Q15796 467 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 UPP1Q16831 310 aa11.18□□□□□ -0.62
GTF3C1-213ENST00000571886 TPRNQ4KMQ1 711 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms