RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 ZBTB42B2RXF5 422 aa18.72■□□□□ 0.59
RPAIN-208ENST00000571043 CABYRO75952 493 aa18.72■□□□□ 0.59
RPAIN-208ENST00000571043 MOCS3O95396 460 aa18.72■□□□□ 0.59
RPAIN-208ENST00000571043 LDHAP00338 332 aaKnown RBP18.72■□□□□ 0.59
RPAIN-208ENST00000571043 PRLRP16471 622 aa18.72■□□□□ 0.59
RPAIN-208ENST00000571043 CAPSQ13938 189 aa18.72■□□□□ 0.59
RPAIN-208ENST00000571043 MXD4Q14582 209 aaPredicted RBP18.72■□□□□ 0.59
RPAIN-208ENST00000571043 ZNF484Q5JVG2 852 aa18.72■□□□□ 0.59
RPAIN-208ENST00000571043 ALKBH5Q6P6C2 394 aaKnown RBP18.72■□□□□ 0.59
RPAIN-208ENST00000571043 GPR161Q8N6U8 529 aaKnown RBP18.72■□□□□ 0.59
RPAIN-208ENST00000571043 U2AF1L4Q8WU68 220 aaKnown RBP18.72■□□□□ 0.59
RPAIN-208ENST00000571043 PSPC1Q8WXF1 523 aaKnown RBP18.72■□□□□ 0.59
RPAIN-208ENST00000571043 UBE2TQ9NPD8 197 aaPredicted RBP18.72■□□□□ 0.59
RPAIN-208ENST00000571043 TRPC6Q9Y210 931 aa18.72■□□□□ 0.59
RPAIN-208ENST00000571043 DNM1LO00429 736 aa18.71■□□□□ 0.59
RPAIN-208ENST00000571043 ENC1O14682 589 aa18.71■□□□□ 0.59
RPAIN-208ENST00000571043 INSRRP14616 1297 aa18.71■□□□□ 0.59
RPAIN-208ENST00000571043 GJA8P48165 433 aa18.71■□□□□ 0.59
RPAIN-208ENST00000571043 GPC3P51654 580 aa18.71■□□□□ 0.59
RPAIN-208ENST00000571043 CLDN10P78369 228 aa18.71■□□□□ 0.59
RPAIN-208ENST00000571043 PSMD6Q15008 389 aa18.71■□□□□ 0.59
RPAIN-208ENST00000571043 SLC30A5Q8TAD4 765 aa18.71■□□□□ 0.59
RPAIN-208ENST00000571043 CCDC127Q96BQ5 260 aa18.71■□□□□ 0.59
RPAIN-208ENST00000571043 FAM213AQ9BRX8 229 aa18.71■□□□□ 0.59
RPAIN-208ENST00000571043 SYT11Q9BT88 431 aa18.71■□□□□ 0.59
RPAIN-208ENST00000571043 SALL4Q9UJQ4 1053 aa18.71■□□□□ 0.59
RPAIN-208ENST00000571043 CTAGE15A4D2H0 777 aa18.7■□□□□ 0.58
RPAIN-208ENST00000571043 KBTBD13C9JR72 458 aa18.7■□□□□ 0.58
RPAIN-208ENST00000571043 DDX3XO00571 662 aaKnown RBP eCLIP18.7■□□□□ 0.582e-11■■■■■ 31.8
RPAIN-208ENST00000571043 TFRCP02786 760 aaKnown RBP18.7■□□□□ 0.58
RPAIN-208ENST00000571043 CTAGE8P0CG41 777 aa18.7■□□□□ 0.58
RPAIN-208ENST00000571043 CAPN2P17655 700 aa18.7■□□□□ 0.58
RPAIN-208ENST00000571043 CKAP4Q07065 602 aaKnown RBP18.7■□□□□ 0.58
RPAIN-208ENST00000571043 ARHGAP44Q17R89 818 aa18.7■□□□□ 0.58
RPAIN-208ENST00000571043 CDCA2Q69YH5 1023 aaPredicted RBP18.7■□□□□ 0.58
RPAIN-208ENST00000571043 ZPBP2Q6X784 338 aa18.7■□□□□ 0.58
RPAIN-208ENST00000571043 CTAGE6Q86UF2 777 aa18.7■□□□□ 0.58
RPAIN-208ENST00000571043 ARHGEF19Q8IW93 802 aa18.7■□□□□ 0.58
RPAIN-208ENST00000571043 CTAGE4Q8IX94 777 aa18.7■□□□□ 0.58
RPAIN-208ENST00000571043 PRPF31Q8WWY3 499 aaKnown RBP18.7■□□□□ 0.58
RPAIN-208ENST00000571043 AGO2Q9UKV8 859 aaKnown RBP18.7■□□□□ 0.58
RPAIN-208ENST00000571043 SNX12Q9UMY4 172 aa18.7■□□□□ 0.58
RPAIN-208ENST00000571043 PHF24Q9UPV7 400 aa18.7■□□□□ 0.58
RPAIN-208ENST00000571043 COL1A2P08123 1366 aa18.7■□□□□ 0.58
RPAIN-208ENST00000571043 NRCAMQ92823 1304 aa18.7■□□□□ 0.58
RPAIN-208ENST00000571043 A0A0B4J269 797 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 RRN3P2A6NIE6 340 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 FOXN3O00409 490 aaPredicted RBP18.69■□□□□ 0.58
RPAIN-208ENST00000571043 PNMA6AP0CW24 399 aaPredicted RBP18.69■□□□□ 0.58
RPAIN-208ENST00000571043 H2AFXP16104 143 aaPredicted RBP18.69■□□□□ 0.58
RPAIN-208ENST00000571043 KLRC1P26715 233 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 IFI16Q16666 785 aaKnown RBP18.69■□□□□ 0.58
RPAIN-208ENST00000571043 NBPF20Q3BBV1 942 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 TEX35Q5T0J7 233 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 FBXL13Q8NEE6 735 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 OLIG1Q8TAK6 271 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 RPGRIP1Q96KN7 1286 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 FAM81BQ96LP2 452 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 GLT1D1Q96MS3 346 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 C2orf40Q9H1Z8 148 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 RAB20Q9NX57 234 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 HDAC6Q9UBN7 1215 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 PUF60Q9UHX1 559 aaKnown RBP18.69■□□□□ 0.58
RPAIN-208ENST00000571043 GRIN2DO15399 1336 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 RRP9O43818 475 aaKnown RBP18.69■□□□□ 0.58
RPAIN-208ENST00000571043 ZC3H11AO75152 810 aaKnown RBP eCLIP18.69■□□□□ 0.58
RPAIN-208ENST00000571043 H2AFZP0C0S5 128 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 SMIM10L2AP0DMW4 78 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 SMIM10L2BP0DMW5 78 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 HOXC8P31273 242 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 MNX1P50219 401 aaPredicted RBP18.69■□□□□ 0.58
RPAIN-208ENST00000571043 MFAP3P55082 362 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 ADAM17P78536 824 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 LAMTOR4Q0VGL1 99 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 PPFIA1Q13136 1202 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 MKRN4PQ13434 485 aaPredicted RBP18.69■□□□□ 0.58
RPAIN-208ENST00000571043 DRP2Q13474 957 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 H2AFVQ71UI9 128 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 SV2AQ7L0J3 742 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 SESTD1Q86VW0 696 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 ZBTB8OSQ8IWT0 167 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 LNX1Q8TBB1 728 aaPredicted RBP18.69■□□□□ 0.58
RPAIN-208ENST00000571043 TMEM106CQ9BVX2 250 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 TARS2Q9BW92 718 aaKnown RBP18.69■□□□□ 0.58
RPAIN-208ENST00000571043 PACSIN1Q9BY11 444 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 CCDC113Q9H0I3 377 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 PDCL3Q9H2J4 239 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 SETD4Q9NVD3 440 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 PCDHGC5Q9Y5F6 944 aa18.69■□□□□ 0.58
RPAIN-208ENST00000571043 A0A0A6YYK5 440 aaPredicted RBP18.68■□□□□ 0.58
RPAIN-208ENST00000571043 A0A1W2PQ45 241 aaPredicted RBP18.68■□□□□ 0.58
RPAIN-208ENST00000571043 A0A1W2PQY0 241 aa18.68■□□□□ 0.58
RPAIN-208ENST00000571043 ASAP2O43150 1006 aa18.68■□□□□ 0.58
RPAIN-208ENST00000571043 TCP1P17987 556 aaKnown RBP18.68■□□□□ 0.58
RPAIN-208ENST00000571043 NAP1L1P55209 391 aaKnown RBP18.68■□□□□ 0.58
RPAIN-208ENST00000571043 GRIK4Q16099 956 aa18.68■□□□□ 0.58
RPAIN-208ENST00000571043 MARCH8Q5T0T0 291 aa18.68■□□□□ 0.58
RPAIN-208ENST00000571043 NFRKBQ6P4R8 1299 aa18.68■□□□□ 0.58
RPAIN-208ENST00000571043 C15orf39Q6ZRI6 1047 aa18.68■□□□□ 0.58
RPAIN-208ENST00000571043 C7orf31Q8N865 590 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms