RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 FAN1Q9Y2M0 1017 aa10.44□□□□□ -0.74
SF3B3-211ENST00000568291 TDRD15B5MCY1 1934 aaKnown RBP10.44□□□□□ -0.74
SF3B3-211ENST00000568291 CASTOR2A6NHX0 329 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 MYMKA6NI61 221 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 TISP43B9A030 160 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 TULP1O00294 542 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-211ENST00000568291 PTGESO14684 152 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 MEFVO15553 781 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-211ENST00000568291 FAM13AO94988 1023 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 MAPTP10636 758 aaKnown RBP10.43□□□□□ -0.74
SF3B3-211ENST00000568291 PCBP1Q15365 356 aaKnown RBP eCLIP10.43□□□□□ -0.74
SF3B3-211ENST00000568291 SHC4Q6S5L8 630 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 HAUS6Q7Z4H7 955 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 LARP4BQ92615 738 aaKnown RBP10.43□□□□□ -0.74
SF3B3-211ENST00000568291 PRIMPOLQ96LW4 560 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 HAPLN2Q9GZV7 340 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 CDT1Q9H211 546 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 POMKQ9H5K3 350 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 PTPRHQ9HD43 1115 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 FAM86C1Q9NVL1 165 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 MARCH5Q9NX47 278 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 ANKFY1Q9P2R3 1169 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 CCDC39Q9UFE4 941 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 GIT1Q9Y2X7 761 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 NR2E1Q9Y466 385 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 FARP1Q9Y4F1 1045 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-211ENST00000568291 HCFC2Q9Y5Z7 792 aa10.43□□□□□ -0.74
SF3B3-211ENST00000568291 FAM186AA6NE01 2351 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.42□□□□□ -0.74
SF3B3-211ENST00000568291 C2CD4DB7Z1M9 353 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 CLASP2O75122 1294 aaKnown RBP10.42□□□□□ -0.74
SF3B3-211ENST00000568291 PDGFBP01127 241 aaPredicted RBP10.42□□□□□ -0.74
SF3B3-211ENST00000568291 WEE2P0C1S8 567 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 CASP1P29466 404 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 MATR3P43243 847 aaKnown RBP eCLIP10.42□□□□□ -0.74
SF3B3-211ENST00000568291 ITIH3Q06033 890 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 SPAG1Q07617 926 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 DSC1Q08554 894 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 STRN3Q13033 797 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 BMS1Q14692 1282 aaKnown RBP10.42□□□□□ -0.74
SF3B3-211ENST00000568291 ZNF568Q3ZCX4 644 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 ZBTB41Q5SVQ8 909 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 RARS2Q5T160 578 aaKnown RBP10.42□□□□□ -0.74
SF3B3-211ENST00000568291 CES5AQ6NT32 575 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 DDX53Q86TM3 631 aaKnown RBP10.42□□□□□ -0.74
SF3B3-211ENST00000568291 SFR1Q86XK3 245 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 C12orf76Q8N812 135 aaPredicted RBP10.42□□□□□ -0.74
SF3B3-211ENST00000568291 MRPL43Q8N983 215 aaKnown RBP10.42□□□□□ -0.74
SF3B3-211ENST00000568291 KREMEN2Q8NCW0 462 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 SPIRE2Q8WWL2 714 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 DDX12PQ92771 950 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 HPS3Q969F9 1004 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 BICD1Q96G01 975 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 NECTIN4Q96NY8 510 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 RPS6KC1Q96S38 1066 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 ADPGKQ9BRR6 497 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 NTPCRQ9BSD7 190 aaKnown RBP10.42□□□□□ -0.74
SF3B3-211ENST00000568291 MRPL4Q9BYD3 311 aaKnown RBP10.42□□□□□ -0.74
SF3B3-211ENST00000568291 FGFBP2Q9BYJ0 223 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 GPR62Q9BZJ7 368 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 ZBP1Q9H171 429 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 TMEM134Q9H6X4 195 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 GOLGA2P5Q9HBQ8 144 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 UBN1Q9NPG3 1134 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 DZANK1Q9NVP4 752 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 KANSL3Q9P2N6 904 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 PCDHA7Q9UN72 937 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 TNFSF13BQ9Y275 285 aa10.42□□□□□ -0.74
SF3B3-211ENST00000568291 RBM19Q9Y4C8 960 aaKnown RBP10.42□□□□□ -0.74
SF3B3-211ENST00000568291 PHLPP2Q6ZVD8 1323 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 ANKRD63C9JTQ0 380 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 K7ENM7 598 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 ABLIM1O14639 778 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 TRAK2O60296 914 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 TBCAO75347 108 aaKnown RBP10.41□□□□□ -0.74
SF3B3-211ENST00000568291 IDEP14735 1019 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 AVPR2P30518 371 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 TNFSF9P41273 254 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 STAT6P42226 847 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 MTHFRP42898 656 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 ME1P48163 572 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 SMTNP53814 917 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 KCNA1Q09470 495 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 MTMR3Q13615 1198 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 AXDND1Q5T1B0 1012 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-211ENST00000568291 KIAA1841Q6NSI8 718 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 SV2BQ7L1I2 683 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 GLYCTKQ8IVS8 523 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 HACE1Q8IYU2 909 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 TDRD5Q8NAT2 981 aaKnown RBP10.41□□□□□ -0.74
SF3B3-211ENST00000568291 TMEM87AQ8NBN3 555 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 RSPH1Q8WYR4 309 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 C18orf25Q96B23 403 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-211ENST00000568291 DHX58Q96C10 678 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 RIPOR3Q96MK2 946 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 ZMAT2Q96NC0 199 aaKnown RBP10.41□□□□□ -0.74
SF3B3-211ENST00000568291 FIZ1Q96SL8 496 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 ADAM7Q9H2U9 754 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 PARVGQ9HBI0 331 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 SORCS3Q9UPU3 1222 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms