RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 PRKD2Q9BZL6 878 aa13.15□□□□□ -0.3
UBR1-206ENST00000566493 CCDC113Q9H0I3 377 aa13.15□□□□□ -0.3
UBR1-206ENST00000566493 NT5C3AQ9H0P0 336 aa13.15□□□□□ -0.3
UBR1-206ENST00000566493 FAM86C1Q9NVL1 165 aa13.15□□□□□ -0.3
UBR1-206ENST00000566493 CACNG4Q9UBN1 327 aa13.15□□□□□ -0.3
UBR1-206ENST00000566493 GDAQ9Y2T3 454 aa13.15□□□□□ -0.3
UBR1-206ENST00000566493 K7ERI5 159 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 STK25O00506 426 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 PTGESO14684 152 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 KIF4AO95239 1232 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 PTGDRQ13258 359 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 NBR1Q14596 966 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 PSMD5Q16401 504 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 RTP2Q5QGT7 225 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 LIN9Q5TKA1 542 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 ATF7IP2Q5U623 682 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 KRT79Q5XKE5 535 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 EEF1DP3Q658K8 133 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 LILRA6Q6PI73 481 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 C4orf32Q8N8J7 132 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 SNX29Q8TEQ0 813 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 NXPE3Q969Y0 559 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 ZNF707Q96C28 371 aaPredicted RBP13.14□□□□□ -0.31
UBR1-206ENST00000566493 KIFC3Q9BVG8 833 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 POLD4Q9HCU8 107 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 DDX19AQ9NUU7 478 aaKnown RBP13.14□□□□□ -0.31
UBR1-206ENST00000566493 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.14□□□□□ -0.31
UBR1-206ENST00000566493 EPS15L1Q9UBC2 864 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 DNM3Q9UQ16 869 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 USP20Q9Y2K6 914 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 KIF3AQ9Y496 699 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 PIEZO1Q92508 2521 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 ZDBF2Q9HCK1 2354 aa13.14□□□□□ -0.31
UBR1-206ENST00000566493 CCDC169A6NNP5 214 aa13.13□□□□□ -0.31
UBR1-206ENST00000566493 LAD1O00515 517 aa13.13□□□□□ -0.31
UBR1-206ENST00000566493 GFRA3O60609 400 aa13.13□□□□□ -0.31
UBR1-206ENST00000566493 N4BP1O75113 896 aaKnown RBP13.13□□□□□ -0.31
UBR1-206ENST00000566493 ZMYND10O75800 440 aa13.13□□□□□ -0.31
UBR1-206ENST00000566493 RFX1P22670 979 aa13.13□□□□□ -0.31
UBR1-206ENST00000566493 U2AF2P26368 475 aaKnown RBP eCLIP13.13□□□□□ -0.31
UBR1-206ENST00000566493 YARSP54577 528 aaKnown RBP13.13□□□□□ -0.31
UBR1-206ENST00000566493 ECM1Q16610 540 aa13.13□□□□□ -0.31
UBR1-206ENST00000566493 NT5DC1Q5TFE4 455 aa13.13□□□□□ -0.31
UBR1-206ENST00000566493 GET4Q7L5D6 327 aaPredicted RBP13.13□□□□□ -0.31
UBR1-206ENST00000566493 SIX5Q8N196 739 aa13.13□□□□□ -0.31
UBR1-206ENST00000566493 PIK3R5Q8WYR1 880 aa13.13□□□□□ -0.31
UBR1-206ENST00000566493 MYADMQ96S97 322 aa13.13□□□□□ -0.31
UBR1-206ENST00000566493 PHLPP2Q6ZVD8 1323 aa13.13□□□□□ -0.31
UBR1-206ENST00000566493 ST18O60284 1047 aa13.12□□□□□ -0.31
UBR1-206ENST00000566493 PAPLNO95428 1278 aa13.12□□□□□ -0.31
UBR1-206ENST00000566493 CFHP08603 1231 aa13.12□□□□□ -0.31
UBR1-206ENST00000566493 HNRNPA1P09651 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
UBR1-206ENST00000566493 PEX3P56589 373 aa13.12□□□□□ -0.31
UBR1-206ENST00000566493 DMP1Q13316 513 aaPredicted RBP13.12□□□□□ -0.31
UBR1-206ENST00000566493 PPM1LQ5SGD2 360 aa13.12□□□□□ -0.31
UBR1-206ENST00000566493 DCLRE1AQ6PJP8 1040 aa13.12□□□□□ -0.31
UBR1-206ENST00000566493 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.12□□□□□ -0.31
UBR1-206ENST00000566493 DTHD1Q6ZMT9 781 aa13.12□□□□□ -0.31
UBR1-206ENST00000566493 IGSF22Q8N9C0 903 aa13.12□□□□□ -0.31
UBR1-206ENST00000566493 LNX1Q8TBB1 728 aaPredicted RBP13.12□□□□□ -0.31
UBR1-206ENST00000566493 RSAD2Q8WXG1 361 aa13.12□□□□□ -0.31
UBR1-206ENST00000566493 RNF25Q96BH1 459 aaPredicted RBP13.12□□□□□ -0.31
UBR1-206ENST00000566493 UROC1Q96N76 676 aa13.12□□□□□ -0.31
UBR1-206ENST00000566493 RTP3Q9BQQ7 232 aa13.12□□□□□ -0.31
UBR1-206ENST00000566493 CLSTN3Q9BQT9 956 aa13.12□□□□□ -0.31
UBR1-206ENST00000566493 CCDC94Q9BW85 323 aaPredicted RBP13.12□□□□□ -0.31
UBR1-206ENST00000566493 WNT16Q9UBV4 365 aa13.12□□□□□ -0.31
UBR1-206ENST00000566493 FBXW11Q9UKB1 542 aa13.12□□□□□ -0.31
UBR1-206ENST00000566493 PCDHB6Q9Y5E3 794 aa13.12□□□□□ -0.31
UBR1-206ENST00000566493 ZFP37Q9Y6Q3 630 aaPredicted RBP13.12□□□□□ -0.31
UBR1-206ENST00000566493 E9PMD0 336 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 TRAPPC3O43617 180 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 NARSO43776 548 aaKnown RBP13.11□□□□□ -0.31
UBR1-206ENST00000566493 XYLBO75191 536 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 B3GAT3O94766 335 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 EDN1P05305 212 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 C8AP07357 584 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 LAMP2P13473 410 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 AOC1P19801 751 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 FSHRP23945 695 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 NPTX2P47972 431 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 TOB1P50616 345 aaPredicted RBP13.11□□□□□ -0.31
UBR1-206ENST00000566493 NAB2Q15742 525 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 GLRA4Q5JXX5 417 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 CWF19L1Q69YN2 538 aaKnown RBP13.11□□□□□ -0.31
UBR1-206ENST00000566493 MCTP1Q6DN14 999 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 SLC44A3Q8N4M1 653 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 DRC1Q96MC2 740 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 KIF2CQ99661 725 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 TCHPQ9BT92 498 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 MRPL4Q9BYD3 311 aaKnown RBP13.11□□□□□ -0.31
UBR1-206ENST00000566493 CXCL16Q9H2A7 254 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 TMEM134Q9H6X4 195 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 KMT5AQ9NQR1 393 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 TOPORSQ9NS56 1045 aaPredicted RBP13.11□□□□□ -0.31
UBR1-206ENST00000566493 KCNG1Q9UIX4 513 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 POLIQ9UNA4 740 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 TNFSF13BQ9Y275 285 aa13.11□□□□□ -0.31
UBR1-206ENST00000566493 RBM19Q9Y4C8 960 aaKnown RBP13.11□□□□□ -0.31
UBR1-206ENST00000566493 TMEM189-UBE2V1I3L0A0 370 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms