RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 TCHPQ9BT92 498 aa8.9□□□□□ -0.98
CDH13-208ENST00000566333 FUCA2Q9BTY2 467 aa8.9□□□□□ -0.98
CDH13-208ENST00000566333 GTPBP4Q9BZE4 634 aaKnown RBP8.9□□□□□ -0.98
CDH13-208ENST00000566333 PCIF1Q9H4Z3 704 aa8.9□□□□□ -0.98
CDH13-208ENST00000566333 TBC1D13Q9NVG8 400 aa8.9□□□□□ -0.98
CDH13-208ENST00000566333 MIOSQ9NXC5 875 aa8.9□□□□□ -0.98
CDH13-208ENST00000566333 KLK14Q9P0G3 267 aa8.9□□□□□ -0.98
CDH13-208ENST00000566333 CNTN3Q9P232 1028 aa8.9□□□□□ -0.98
CDH13-208ENST00000566333 CGNQ9P2M7 1197 aaKnown RBP8.9□□□□□ -0.98
CDH13-208ENST00000566333 LRFN2Q9ULH4 789 aa8.9□□□□□ -0.98
CDH13-208ENST00000566333 INPP5FQ9Y2H2 1132 aa8.9□□□□□ -0.98
CDH13-208ENST00000566333 GIT1Q9Y2X7 761 aa8.9□□□□□ -0.98
CDH13-208ENST00000566333 PCDHA11Q9Y5I1 949 aa8.9□□□□□ -0.98
CDH13-208ENST00000566333 MRPL42Q9Y6G3 142 aaKnown RBP8.9□□□□□ -0.98
CDH13-208ENST00000566333 PRRC2BQ5JSZ5 2229 aaKnown RBP8.9□□□□□ -0.98
CDH13-208ENST00000566333 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.89□□□□□ -0.99
CDH13-208ENST00000566333 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.89□□□□□ -0.99
CDH13-208ENST00000566333 KIAA0391O15091 583 aaKnown RBP8.89□□□□□ -0.99
CDH13-208ENST00000566333 EXTL3O43909 919 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 KIF20AO95235 890 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 NFICP08651 508 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 NR2F2P24468 414 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 CCNE1P24864 410 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 PPP1R2P41236 205 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 MATR3P43243 847 aaKnown RBP eCLIP8.89□□□□□ -0.99
CDH13-208ENST00000566333 CASP4P49662 377 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 CYP2J2P51589 502 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 LRRC63Q05C16 580 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 TYRO3Q06418 890 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 SOX4Q06945 474 aaPredicted RBP8.89□□□□□ -0.99
CDH13-208ENST00000566333 GRIK3Q13003 919 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 PAK1Q13153 545 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 SNRNP35Q16560 246 aaKnown RBP8.89□□□□□ -0.99
CDH13-208ENST00000566333 KYAT1Q16773 422 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 NOMO2Q5JPE7 1267 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 GLRA4Q5JXX5 417 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 ANKRD40Q6AI12 368 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 FOXR2Q6PJQ5 311 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 EFCAB13Q8IY85 973 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 HACE1Q8IYU2 909 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 GPD1LQ8N335 351 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 XXYLT1Q8NBI6 393 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 PLEKHO2Q8TD55 490 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 NELFBQ8WX92 580 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 RSPH1Q8WYR4 309 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 CLP1Q92989 425 aaKnown RBP8.89□□□□□ -0.99
CDH13-208ENST00000566333 DHTKD1Q96HY7 919 aaPredicted RBP8.89□□□□□ -0.99
CDH13-208ENST00000566333 FAM84AQ96KN4 292 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 DUSP9Q99956 384 aaKnown RBP8.89□□□□□ -0.99
CDH13-208ENST00000566333 CCDC94Q9BW85 323 aaPredicted RBP8.89□□□□□ -0.99
CDH13-208ENST00000566333 CWH43Q9H720 699 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 UBN1Q9NPG3 1134 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 TOPORSQ9NS56 1045 aaPredicted RBP8.89□□□□□ -0.99
CDH13-208ENST00000566333 RBAKQ9NYW8 714 aaPredicted RBP8.89□□□□□ -0.99
CDH13-208ENST00000566333 CACNG4Q9UBN1 327 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 PARP2Q9UGN5 583 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 INSL6Q9Y581 213 aa8.89□□□□□ -0.99
CDH13-208ENST00000566333 PLXNA3P51805 1871 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 SMIM28A0A1B0GU29 152 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 SYCE3A1L190 88 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 CALUO43852 315 aaPredicted RBP8.88□□□□□ -0.99
CDH13-208ENST00000566333 AKAP3O75969 853 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 DDHD2O94830 711 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 POMCP01189 267 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 KCNE1P15382 129 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 PBX3P40426 434 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 POU5F1Q01860 360 aaKnown RBP8.88□□□□□ -0.99
CDH13-208ENST00000566333 TAP1Q03518 808 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 PPP2R3AQ06190 1150 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 CYP24A1Q07973 514 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 STIM1Q13586 685 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 BTG3Q14201 252 aaPredicted RBP8.88□□□□□ -0.99
CDH13-208ENST00000566333 MYBPC2Q14324 1141 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 RAB30Q15771 203 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 STX1AQ16623 288 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 SKOR2Q2VWA4 1001 aaPredicted RBP8.88□□□□□ -0.99
CDH13-208ENST00000566333 ZSCAN23Q3MJ62 389 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 TMEM173Q86WV6 379 aaPredicted RBP8.88□□□□□ -0.99
CDH13-208ENST00000566333 ZNF280BQ86YH2 543 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 MLKLQ8NB16 471 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 BCL7CQ8WUZ0 217 aaPredicted RBP8.88□□□□□ -0.99
CDH13-208ENST00000566333 SYAP1Q96A49 352 aaPredicted RBP8.88□□□□□ -0.99
CDH13-208ENST00000566333 C18orf25Q96B23 403 aaPredicted RBP8.88□□□□□ -0.99
CDH13-208ENST00000566333 EEF2KMTQ96G04 330 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 LRCH3Q96II8 777 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 ACAP3Q96P50 834 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 ZBED2Q9BTP6 218 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 MRPL9Q9BYD2 267 aaKnown RBP8.88□□□□□ -0.99
CDH13-208ENST00000566333 NKX2-4Q9H2Z4 354 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 RPF1Q9H9Y2 349 aaKnown RBP8.88□□□□□ -0.99
CDH13-208ENST00000566333 DNAJB4Q9UDY4 337 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 TUBGCP4Q9UGJ1 667 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 RWDD2AQ9UIY3 292 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 COL6A3P12111 3177 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 PTPRDP23468 1912 aa8.88□□□□□ -0.99
CDH13-208ENST00000566333 EPOPA6NHQ4 379 aa8.87□□□□□ -0.99
CDH13-208ENST00000566333 LACTBL1A8MY62 500 aa8.87□□□□□ -0.99
CDH13-208ENST00000566333 F8W810 466 aa8.87□□□□□ -0.99
CDH13-208ENST00000566333 SLC16A3O15427 465 aaKnown RBP8.87□□□□□ -0.99
CDH13-208ENST00000566333 EXOC3O60645 756 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms