RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 R3HDM2Q9Y2K5 976 aaKnown RBP14.44□□□□□ -0.1
CLK3-215ENST00000564353 ATAD5Q96QE3 1844 aa14.44□□□□□ -0.1
CLK3-215ENST00000564353 DNM1LO00429 736 aa14.44□□□□□ -0.1
CLK3-215ENST00000564353 HMGB2P26583 209 aaKnown RBP14.44□□□□□ -0.1
CLK3-215ENST00000564353 MAPK4P31152 587 aa14.44□□□□□ -0.1
CLK3-215ENST00000564353 SMTNP53814 917 aa14.44□□□□□ -0.1
CLK3-215ENST00000564353 MTM1Q13496 603 aa14.44□□□□□ -0.1
CLK3-215ENST00000564353 SGO2Q562F6 1265 aa14.44□□□□□ -0.1
CLK3-215ENST00000564353 CAPN12Q6ZSI9 719 aa14.44□□□□□ -0.1
CLK3-215ENST00000564353 CCDC13Q8IYE1 715 aa14.44□□□□□ -0.1
CLK3-215ENST00000564353 FBXL13Q8NEE6 735 aa14.44□□□□□ -0.1
CLK3-215ENST00000564353 PLCD4Q9BRC7 762 aa14.44□□□□□ -0.1
CLK3-215ENST00000564353 PXMP2Q9NR77 195 aa14.44□□□□□ -0.1
CLK3-215ENST00000564353 KRT17Q04695 432 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 CCDC121Q6ZUS5 278 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 NIM1KQ8IY84 436 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 ANKRD42Q8N9B4 389 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 SUPT20HQ8NEM7 779 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 SHC3Q92529 594 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 ZNF516Q92618 1163 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 MRRFQ96E11 262 aaKnown RBP14.43□□□□□ -0.1
CLK3-215ENST00000564353 TXLNGYQ9BZA5 131 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 SLC38A10Q9HBR0 1119 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 SH3BP1Q9Y3L3 701 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 WDR64B1ANS9 1081 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 VIMP08670 466 aaKnown RBP14.43□□□□□ -0.1
CLK3-215ENST00000564353 CHRNA3P32297 505 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 PSMC4P43686 418 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 FSTL1Q12841 308 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 BYSLQ13895 437 aaKnown RBP14.43□□□□□ -0.1
CLK3-215ENST00000564353 ZNF394Q53GI3 561 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 C11orf63Q6NUN7 778 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 DLK2Q6UY11 383 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 NLRX1Q86UT6 975 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 TAB3Q8N5C8 712 aaPredicted RBP14.43□□□□□ -0.1
CLK3-215ENST00000564353 C11orf70Q9BRQ4 267 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 CD248Q9HCU0 757 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 MYOZ2Q9NPC6 264 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 RNF146Q9NTX7 359 aa14.43□□□□□ -0.1
CLK3-215ENST00000564353 PI4K2BG5E9Z4 385 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 CD58P19256 250 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 KCNA3P22001 575 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 SCP2P22307 547 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 RWDD2BP57060 319 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 CDR2Q01850 454 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 ATP13A4Q4VNC1 1196 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 NBPF12Q5TAG4 269 aaPredicted RBP14.42□□□□□ -0.1
CLK3-215ENST00000564353 KAZNQ674X7 775 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 MCF2L2Q86YR7 1114 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 CCDC60Q8IWA6 550 aaPredicted RBP14.42□□□□□ -0.1
CLK3-215ENST00000564353 XPO6Q96QU8 1125 aaKnown RBP14.42□□□□□ -0.1
CLK3-215ENST00000564353 JPH2Q9BR39 696 aaPredicted RBP14.42□□□□□ -0.1
CLK3-215ENST00000564353 PTPRJQ12913 1337 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 CTNNA2P26232 953 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 FNTAP49354 379 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 NCKAP1LP55160 1127 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 DHX34Q14147 1143 aaKnown RBP14.42□□□□□ -0.1
CLK3-215ENST00000564353 SIX1Q15475 284 aaPredicted RBP14.42□□□□□ -0.1
CLK3-215ENST00000564353 AGBL2Q5U5Z8 902 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 SNRNP48Q6IEG0 339 aaKnown RBP14.42□□□□□ -0.1
CLK3-215ENST00000564353 TMEM130Q8N3G9 435 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.42□□□□□ -0.1
CLK3-215ENST00000564353 CD101Q93033 1021 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 TBC1D22BQ9NU19 505 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 HAUS2Q9NVX0 235 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 GJA3Q9Y6H8 435 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 UMODL1Q5DID0 1318 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 MIF4GDA9UHW6 222 aaKnown RBP14.42□□□□□ -0.1
CLK3-215ENST00000564353 RIPK2O43353 540 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 NR3C2P08235 984 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 HMGCS2P54868 508 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 NLRP11P59045 1033 aaKnown RBP14.42□□□□□ -0.1
CLK3-215ENST00000564353 CYP24A1Q07973 514 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 KYNUQ16719 465 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 ANKS1BQ7Z6G8 1248 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 LRRC34Q8IZ02 419 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 CACNA2D3Q8IZS8 1091 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 GDAP1Q8TB36 358 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 DDX1Q92499 740 aaKnown RBP14.42□□□□□ -0.1
CLK3-215ENST00000564353 HAUS1Q96CS2 278 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 SGSM3Q96HU1 749 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 ELAC2Q9BQ52 826 aaKnown RBP14.42□□□□□ -0.1
CLK3-215ENST00000564353 ADAM7Q9H2U9 754 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 TMEM8AQ9HCN3 771 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 MTUS1Q9ULD2 1270 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 PCDHA3Q9Y5H8 950 aa14.42□□□□□ -0.1
CLK3-215ENST00000564353 FAM187AA6NFU0 413 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 GRIN3BO60391 1043 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 ECEL1O95672 775 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 TCF4P15884 667 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 MICALCLQ6ZW33 695 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 HOOK3Q86VS8 718 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 C4orf19Q8IY42 314 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 EIF1ADQ8N9N8 165 aaKnown RBP14.41□□□□□ -0.1
CLK3-215ENST00000564353 THOC1Q96FV9 657 aaKnown RBP14.41□□□□□ -0.1
CLK3-215ENST00000564353 CDC42EP4Q9H3Q1 356 aaKnown RBP14.41□□□□□ -0.1
CLK3-215ENST00000564353 KCNK9Q9NPC2 374 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 MTRF1LQ9UGC7 380 aaKnown RBP14.41□□□□□ -0.1
CLK3-215ENST00000564353 RASGRF2O14827 1237 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 PIAS1O75925 651 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms