RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 CLDN3O15551 220 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 ACRP10323 421 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 MPZL3Q6UWV2 235 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 C16orf59Q7L2K0 433 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 HS2ST1Q7LGA3 356 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 ZBTB33Q86T24 672 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 SEPT8Q92599 483 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 DUSP9Q99956 384 aaKnown RBP12.66□□□□□ -0.38
HERC1-214ENST00000561400 ADAM2Q99965 735 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 TCHPQ9BT92 498 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 CDT1Q9H211 546 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 PCIF1Q9H4Z3 704 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 RMI1Q9H9A7 625 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 CHCHD3Q9NX63 227 aaKnown RBP12.66□□□□□ -0.38
HERC1-214ENST00000561400 SUN2Q9UH99 717 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 DACH1Q9UI36 760 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 CITO14578 2027 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 LAMA2P24043 3122 aaKnown RBP12.66□□□□□ -0.38
HERC1-214ENST00000561400 N4BP3O15049 544 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 CAPN15O75808 1086 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 ERCC5P28715 1186 aaPredicted RBP12.66□□□□□ -0.38
HERC1-214ENST00000561400 EPHB4P54760 987 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 MCL1Q07820 350 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 ZNF568Q3ZCX4 644 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 TWF2Q6IBS0 349 aaKnown RBP12.66□□□□□ -0.38
HERC1-214ENST00000561400 ARMCX5Q6P1M9 558 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 SLC27A1Q6PCB7 646 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 POMGNT1Q8WZA1 660 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 RWDD2AQ9UIY3 292 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 TTC3P53804 2025 aa12.66□□□□□ -0.38
HERC1-214ENST00000561400 FAM189A1O60320 539 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 HARSP12081 509 aaKnown RBP12.65□□□□□ -0.38
HERC1-214ENST00000561400 GARTP22102 1010 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 MAGEA9P43362 315 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 RGS19P49795 217 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 FPGSQ05932 587 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 LRRC63Q05C16 580 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 BMS1Q14692 1282 aaKnown RBP12.65□□□□□ -0.38
HERC1-214ENST00000561400 SEZ6Q53EL9 994 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 CCDC26Q8TAB7 109 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 CXorf38Q8TB03 319 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 APBB2Q92870 758 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 SLX1AQ9BQ83 275 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 IL23AQ9NPF7 189 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 DMAC2Q9NW81 257 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 NR2E3Q9Y5X4 410 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 ANK1P16157 1881 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 PES1O00541 588 aaKnown RBP12.65□□□□□ -0.38
HERC1-214ENST00000561400 CALUO43852 315 aaPredicted RBP12.65□□□□□ -0.38
HERC1-214ENST00000561400 NPTXRO95502 500 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 NR3C1P04150 777 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 MATR3P43243 847 aaKnown RBP eCLIP12.65□□□□□ -0.384e-6■■■□□ 15.7
HERC1-214ENST00000561400 CYP2J2P51589 502 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 SNRPFP62306 86 aaKnown RBP12.65□□□□□ -0.38
HERC1-214ENST00000561400 EDRF1Q3B7T1 1238 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 ZBTB41Q5SVQ8 909 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 CCDC181Q5TID7 509 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 SLFN12LQ6IEE8 588 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 CNKSR3Q6P9H4 555 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 C12orf56Q8IXR9 622 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 RPUSD2Q8IZ73 545 aaKnown RBP12.65□□□□□ -0.38
HERC1-214ENST00000561400 GOLGA5Q8TBA6 731 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 SAAL1Q96ER3 474 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 ADPGKQ9BRR6 497 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 MSTO1Q9BUK6 570 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 FTHL17Q9BXU8 183 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 TSPYL2Q9H2G4 693 aaPredicted RBP12.65□□□□□ -0.38
HERC1-214ENST00000561400 RGS18Q9NS28 235 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 SPTLC3Q9NUV7 552 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 HSPBP1Q9NZL4 362 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 HES2Q9Y543 173 aa12.65□□□□□ -0.38
HERC1-214ENST00000561400 RANBP2P49792 3224 aaKnown RBP12.65□□□□□ -0.39
HERC1-214ENST00000561400 PTPRSQ13332 1948 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.64□□□□□ -0.39
HERC1-214ENST00000561400 ENPP3O14638 875 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 NR2F2P24468 414 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 CASP4P49662 377 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 ZNF165P49910 485 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 PPIGQ13427 754 aaKnown RBP eCLIP12.64□□□□□ -0.39
HERC1-214ENST00000561400 NFIL3Q16649 462 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 FOXR2Q6PJQ5 311 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 CRELD2Q6UXH1 353 aaPredicted RBP12.64□□□□□ -0.39
HERC1-214ENST00000561400 SLC9A9Q8IVB4 645 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 TMEM192Q8IY95 271 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 SMG8Q8ND04 991 aaKnown RBP12.64□□□□□ -0.39
HERC1-214ENST00000561400 TMEM174Q8WUU8 243 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 CCDC51Q96ER9 411 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 TRAIPQ9BWF2 469 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 NXF3Q9H4D5 531 aaKnown RBP12.64□□□□□ -0.39
HERC1-214ENST00000561400 FAM105AQ9NUU6 356 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 AGO2Q9UKV8 859 aaKnown RBP12.64□□□□□ -0.39
HERC1-214ENST00000561400 A0A0U1RQF3 1178 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 BICDL2A1A5D9 508 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 GOLGA8IPA6NC78 632 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 GOLGA8JA6NMD2 632 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 C9IYK1 514 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 RIOK3O14730 519 aaKnown RBP12.64□□□□□ -0.39
HERC1-214ENST00000561400 PFKMP08237 780 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 MCF2P10911 925 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 TNFSF9P41273 254 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms