RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 PRKD2Q9BZL6 878 aa29.77■■■□□ 2.36
SNRPA1-215ENST00000561187 ZDHHC7Q9NXF8 308 aa29.77■■■□□ 2.36
SNRPA1-215ENST00000561187 ZFHX2Q9C0A1 2572 aaPredicted RBP29.77■■■□□ 2.36
SNRPA1-215ENST00000561187 TRIP11Q15643 1979 aa29.76■■■□□ 2.35
SNRPA1-215ENST00000561187 MUTP22033 750 aa29.76■■■□□ 2.35
SNRPA1-215ENST00000561187 NTHL1P78549 312 aa29.76■■■□□ 2.35
SNRPA1-215ENST00000561187 MCTP1Q6DN14 999 aa29.76■■■□□ 2.35
SNRPA1-215ENST00000561187 LNX1Q8TBB1 728 aaPredicted RBP29.76■■■□□ 2.35
SNRPA1-215ENST00000561187 CLSTN3Q9BQT9 956 aa29.76■■■□□ 2.35
SNRPA1-215ENST00000561187 RUSC1Q9BVN2 902 aa29.76■■■□□ 2.35
SNRPA1-215ENST00000561187 IGSF9Q9P2J2 1179 aa29.76■■■□□ 2.35
SNRPA1-215ENST00000561187 FBXW11Q9UKB1 542 aa29.76■■■□□ 2.35
SNRPA1-215ENST00000561187 PI15O43692 258 aa29.75■■■□□ 2.35
SNRPA1-215ENST00000561187 GFRA3O60609 400 aa29.75■■■□□ 2.35
SNRPA1-215ENST00000561187 HIP1RO75146 1068 aa29.75■■■□□ 2.35
SNRPA1-215ENST00000561187 ZMYND10O75800 440 aa29.75■■■□□ 2.35
SNRPA1-215ENST00000561187 U2AF2P26368 475 aaKnown RBP eCLIP29.75■■■□□ 2.35
SNRPA1-215ENST00000561187 EFNA5P52803 228 aa29.75■■■□□ 2.35
SNRPA1-215ENST00000561187 IL17AQ16552 155 aa29.75■■■□□ 2.35
SNRPA1-215ENST00000561187 LIN9Q5TKA1 542 aa29.75■■■□□ 2.35
SNRPA1-215ENST00000561187 IGSF22Q8N9C0 903 aa29.75■■■□□ 2.35
SNRPA1-215ENST00000561187 HDAC7Q8WUI4 952 aa29.75■■■□□ 2.35
SNRPA1-215ENST00000561187 PIK3R5Q8WYR1 880 aa29.75■■■□□ 2.35
SNRPA1-215ENST00000561187 CA14Q9ULX7 337 aa29.75■■■□□ 2.35
SNRPA1-215ENST00000561187 POLIQ9UNA4 740 aa29.75■■■□□ 2.35
SNRPA1-215ENST00000561187 DMDP11532 3685 aa29.74■■■□□ 2.35
SNRPA1-215ENST00000561187 I3L4J1 428 aa29.74■■■□□ 2.35
SNRPA1-215ENST00000561187 K7ERI5 159 aa29.74■■■□□ 2.35
SNRPA1-215ENST00000561187 CCL16O15467 120 aa29.74■■■□□ 2.35
SNRPA1-215ENST00000561187 HARSP12081 509 aaKnown RBP29.74■■■□□ 2.35
SNRPA1-215ENST00000561187 NPR3P17342 541 aa29.74■■■□□ 2.35
SNRPA1-215ENST00000561187 CLCNKBP51801 687 aa29.74■■■□□ 2.35
SNRPA1-215ENST00000561187 ZNF568Q3ZCX4 644 aa29.74■■■□□ 2.35
SNRPA1-215ENST00000561187 CYP26C1Q6V0L0 522 aa29.74■■■□□ 2.35
SNRPA1-215ENST00000561187 KCNK18Q7Z418 384 aa29.74■■■□□ 2.35
SNRPA1-215ENST00000561187 GRASPQ7Z6J2 395 aaPredicted RBP29.74■■■□□ 2.35
SNRPA1-215ENST00000561187 RAB34Q9BZG1 259 aa29.74■■■□□ 2.35
SNRPA1-215ENST00000561187 EPS15L1Q9UBC2 864 aa29.74■■■□□ 2.35
SNRPA1-215ENST00000561187 PHLPP2Q6ZVD8 1323 aa29.73■■■□□ 2.35
SNRPA1-215ENST00000561187 STK25O00506 426 aa29.73■■■□□ 2.35
SNRPA1-215ENST00000561187 B3GAT3O94766 335 aa29.73■■■□□ 2.35
SNRPA1-215ENST00000561187 C8AP07357 584 aa29.73■■■□□ 2.35
SNRPA1-215ENST00000561187 NPTX2P47972 431 aa29.73■■■□□ 2.35
SNRPA1-215ENST00000561187 RAD51AP2Q09MP3 1159 aa29.73■■■□□ 2.35
SNRPA1-215ENST00000561187 KRT79Q5XKE5 535 aa29.73■■■□□ 2.35
SNRPA1-215ENST00000561187 GPR65Q8IYL9 337 aa29.73■■■□□ 2.35
SNRPA1-215ENST00000561187 DAW1Q8N136 415 aa29.73■■■□□ 2.35
SNRPA1-215ENST00000561187 RHOBTB2Q9BYZ6 727 aa29.73■■■□□ 2.35
SNRPA1-215ENST00000561187 CDT1Q9H211 546 aa29.73■■■□□ 2.35
SNRPA1-215ENST00000561187 DNM3Q9UQ16 869 aa29.73■■■□□ 2.35
SNRPA1-215ENST00000561187 VPS13AQ96RL7 3174 aa29.72■■■□□ 2.35
SNRPA1-215ENST00000561187 RFX1P22670 979 aa29.72■■■□□ 2.35
SNRPA1-215ENST00000561187 DMP1Q13316 513 aaPredicted RBP29.72■■■□□ 2.35
SNRPA1-215ENST00000561187 PPM1LQ5SGD2 360 aa29.72■■■□□ 2.35
SNRPA1-215ENST00000561187 PPP1R10Q96QC0 940 aaKnown RBP29.72■■■□□ 2.35
SNRPA1-215ENST00000561187 PLIN2Q99541 437 aa29.72■■■□□ 2.35
SNRPA1-215ENST00000561187 SFI1A8K8P3 1242 aa29.71■■■□□ 2.35
SNRPA1-215ENST00000561187 FSHRP23945 695 aa29.71■■■□□ 2.35
SNRPA1-215ENST00000561187 TKTP29401 623 aaKnown RBP29.71■■■□□ 2.35
SNRPA1-215ENST00000561187 BRCC3P46736 316 aa29.71■■■□□ 2.35
SNRPA1-215ENST00000561187 CLCN5P51795 746 aa29.71■■■□□ 2.35
SNRPA1-215ENST00000561187 ELAVL2Q12926 359 aaKnown RBP29.71■■■□□ 2.35
SNRPA1-215ENST00000561187 PDIA5Q14554 519 aa29.71■■■□□ 2.35
SNRPA1-215ENST00000561187 TAS1R3Q7RTX0 852 aa29.71■■■□□ 2.35
SNRPA1-215ENST00000561187 SLC44A3Q8N4M1 653 aa29.71■■■□□ 2.35
SNRPA1-215ENST00000561187 C3orf58Q8NDZ4 430 aa29.71■■■□□ 2.35
SNRPA1-215ENST00000561187 SLC7A14Q8TBB6 771 aa29.71■■■□□ 2.35
SNRPA1-215ENST00000561187 TARS2Q9BW92 718 aaKnown RBP29.71■■■□□ 2.35
SNRPA1-215ENST00000561187 IRF2BPLQ9H1B7 796 aa29.71■■■□□ 2.35
SNRPA1-215ENST00000561187 KMT5AQ9NQR1 393 aa29.71■■■□□ 2.35
SNRPA1-215ENST00000561187 TNFSF13BQ9Y275 285 aa29.71■■■□□ 2.35
SNRPA1-215ENST00000561187 KRBA1A5PL33 1030 aa29.7■■■□□ 2.35
SNRPA1-215ENST00000561187 LAMP2P13473 410 aa29.7■■■□□ 2.35
SNRPA1-215ENST00000561187 AOC1P19801 751 aa29.7■■■□□ 2.35
SNRPA1-215ENST00000561187 OR1D2P34982 312 aa29.7■■■□□ 2.35
SNRPA1-215ENST00000561187 NUBP1P53384 320 aa29.7■■■□□ 2.35
SNRPA1-215ENST00000561187 SOX4Q06945 474 aaPredicted RBP29.7■■■□□ 2.35
SNRPA1-215ENST00000561187 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.7■■■□□ 2.35
SNRPA1-215ENST00000561187 DTHD1Q6ZMT9 781 aa29.7■■■□□ 2.35
SNRPA1-215ENST00000561187 ACO2Q99798 780 aaKnown RBP29.7■■■□□ 2.35
SNRPA1-215ENST00000561187 MMTAG2Q9BU76 263 aaKnown RBP29.7■■■□□ 2.35
SNRPA1-215ENST00000561187 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.7■■■□□ 2.35
SNRPA1-215ENST00000561187 NUMBLQ9Y6R0 609 aa29.7■■■□□ 2.35
SNRPA1-215ENST00000561187 CFAP54Q96N23 3096 aa29.7■■■□□ 2.34
SNRPA1-215ENST00000561187 SLC16A4O15374 487 aa29.69■■■□□ 2.34
SNRPA1-215ENST00000561187 YARSP54577 528 aaKnown RBP29.69■■■□□ 2.34
SNRPA1-215ENST00000561187 MAPK7Q13164 816 aa29.69■■■□□ 2.34
SNRPA1-215ENST00000561187 RINT1Q6NUQ1 792 aa29.69■■■□□ 2.34
SNRPA1-215ENST00000561187 APBB1IPQ7Z5R6 666 aaPredicted RBP29.69■■■□□ 2.34
SNRPA1-215ENST00000561187 GPR152Q8TDT2 470 aa29.69■■■□□ 2.34
SNRPA1-215ENST00000561187 CCDC94Q9BW85 323 aaPredicted RBP29.69■■■□□ 2.34
SNRPA1-215ENST00000561187 MRPL4Q9BYD3 311 aaKnown RBP29.69■■■□□ 2.34
SNRPA1-215ENST00000561187 CDY1Q9Y6F8 540 aa29.69■■■□□ 2.34
SNRPA1-215ENST00000561187 HTR4Q13639 388 aa29.68■■■□□ 2.34
SNRPA1-215ENST00000561187 RSPO2Q6UXX9 243 aaPredicted RBP29.68■■■□□ 2.34
SNRPA1-215ENST00000561187 DRC1Q96MC2 740 aa29.68■■■□□ 2.34
SNRPA1-215ENST00000561187 TCHPQ9BT92 498 aa29.68■■■□□ 2.34
SNRPA1-215ENST00000561187 HCFC1R1Q9NWW0 138 aa29.68■■■□□ 2.34
SNRPA1-215ENST00000561187 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP29.68■■■□□ 2.34
SNRPA1-215ENST00000561187 ARHGAP28Q9P2N2 729 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms