RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 HRO43593 1189 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 MAFO75444 373 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-215ENST00000560424 KCNK5O95279 499 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 TDGF1P13385 188 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 SATB1Q01826 763 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 SRSF5Q13243 272 aaKnown RBP10.31□□□□□ -0.76
SMAD3-215ENST00000560424 FZD5Q13467 585 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 LRRC32Q14392 662 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 GRM2Q14416 872 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 RTN1Q16799 776 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 RTP2Q5QGT7 225 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 AXDND1Q5T1B0 1012 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-215ENST00000560424 PSAPL1Q6NUJ1 521 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 NOTUMQ6P988 496 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 PDXDC1Q6P996 788 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 FAM160A2Q8N612 972 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-215ENST00000560424 NECAB1Q8N987 351 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 NSUN7Q8NE18 718 aaKnown RBP10.31□□□□□ -0.76
SMAD3-215ENST00000560424 RDM1Q8NG50 284 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 PSPC1Q8WXF1 523 aaKnown RBP10.31□□□□□ -0.76
SMAD3-215ENST00000560424 ELSPBP1Q96BH3 223 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 ZFP42Q96MM3 310 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 RIT2Q99578 217 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 LARP6Q9BRS8 491 aaKnown RBP10.31□□□□□ -0.76
SMAD3-215ENST00000560424 TRMT61BQ9BVS5 477 aaKnown RBP10.31□□□□□ -0.76
SMAD3-215ENST00000560424 ARRDC1-AS1Q9H2J1 176 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 UNC45AQ9H3U1 944 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 IFT122Q9HBG6 1241 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 ZFP14Q9HCL3 533 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 HCFC1R1Q9NWW0 138 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 PKD1L2Q7Z442 2459 aa10.31□□□□□ -0.76
SMAD3-215ENST00000560424 CNOT1A5YKK6 2376 aaKnown RBP10.31□□□□□ -0.76
SMAD3-215ENST00000560424 DOCK6Q96HP0 2047 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 ZBTB43O43298 467 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 CDKL5O76039 1030 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 CTDNEP1O95476 244 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 EFEMP2O95967 443 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 SYT1P21579 422 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 GJB2P29033 226 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 GNA11P29992 359 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 AXLP30530 894 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 FOXC1Q12948 553 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 GRIK3Q13003 919 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 HSP90AA2PQ14568 343 aaPredicted RBP10.3□□□□□ -0.76
SMAD3-215ENST00000560424 SF3A2Q15428 464 aaKnown RBP10.3□□□□□ -0.76
SMAD3-215ENST00000560424 UVSSAQ2YD98 709 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 UBXN11Q5T124 520 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 STPG1Q5TH74 334 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 FAM171A1Q5VUB5 890 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 CPLX2Q6PUV4 134 aaKnown RBP10.3□□□□□ -0.76
SMAD3-215ENST00000560424 SPEM1Q8N4L4 309 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 SMG8Q8ND04 991 aaKnown RBP10.3□□□□□ -0.76
SMAD3-215ENST00000560424 FAM200AQ8TCP9 573 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 HASPINQ8TF76 798 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 CRYGNQ8WXF5 182 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 RABGGTAQ92696 567 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 CCDC51Q96ER9 411 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 FOXD4L1Q9NU39 408 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 DNMT3BQ9UBC3 853 aaKnown RBP10.3□□□□□ -0.76
SMAD3-215ENST00000560424 NAP1L2Q9ULW6 460 aaPredicted RBP10.3□□□□□ -0.76
SMAD3-215ENST00000560424 LHX6Q9UPM6 363 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 GIT1Q9Y2X7 761 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 ZDHHC9Q9Y397 364 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 HES2Q9Y543 173 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 PIAS3Q9Y6X2 628 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 STK36Q9NRP7 1315 aa10.3□□□□□ -0.76
SMAD3-215ENST00000560424 MSH4O15457 936 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 STX6O43752 255 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 DKC1O60832 514 aaKnown RBP eCLIP10.29□□□□□ -0.76
SMAD3-215ENST00000560424 LRG1P02750 347 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 RHOP08100 348 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 POU2F2P09086 479 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 ZNF806P0C7X5 589 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 IFNAR1P17181 557 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 GDI1P31150 447 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 HOXA11P31270 313 aaPredicted RBP10.29□□□□□ -0.76
SMAD3-215ENST00000560424 CIITAP33076 1130 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 NOVA1P51513 510 aaKnown RBP10.29□□□□□ -0.76
SMAD3-215ENST00000560424 ELAVL2Q12926 359 aaKnown RBP10.29□□□□□ -0.76
SMAD3-215ENST00000560424 PCBP1Q15365 356 aaKnown RBP eCLIP10.29□□□□□ -0.76
SMAD3-215ENST00000560424 CCDC6Q16204 474 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 NTRK3Q16288 839 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 RNF43Q68DV7 783 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 TANGO2Q6ICL3 276 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 C1orf228Q6PIY5 440 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 KDF1Q8NAX2 398 aaPredicted RBP10.29□□□□□ -0.76
SMAD3-215ENST00000560424 RNF149Q8NC42 400 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 BICD2Q8TD16 824 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 CSGALNACT1Q8TDX6 532 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 TCP11Q8WWU5 503 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 PIK3R5Q8WYR1 880 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 GBP4Q96PP9 640 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 CLSTN3Q9BQT9 956 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 EIF2AQ9BY44 585 aaKnown RBP10.29□□□□□ -0.76
SMAD3-215ENST00000560424 PLA2G2FQ9BZM2 168 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 RNF39Q9H2S5 420 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 MIOSQ9NXC5 875 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 PARP2Q9UGN5 583 aa10.29□□□□□ -0.76
SMAD3-215ENST00000560424 ESYT2A0FGR8 921 aa10.28□□□□□ -0.76
SMAD3-215ENST00000560424 GOLGA8AA7E2F4 631 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms