RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 PRRX2Q99811 253 aa6.41□□□□□ -1.38
CRNDE-208ENST00000560029 IPPQ9Y573 584 aa6.41□□□□□ -1.38
CRNDE-208ENST00000560029 MTSS1O43312 755 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 ITGA10O75578 1167 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 VCAM1P19320 739 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 ECHS1P30084 290 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 CASRP41180 1078 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 FXR1P51114 621 aaKnown RBP eCLIP6.4□□□□□ -1.38
CRNDE-208ENST00000560029 SCNN1GP51170 649 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 WNT3AP56704 352 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 DUSP2Q05923 314 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 MGAT2Q10469 447 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 IL10RAQ13651 578 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 RIN1Q13671 783 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 FAM102BQ5T8I3 360 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 Q6ZRM9 215 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 MYO1HQ8N1T3 1032 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 LILRA3Q8N6C8 439 aaPredicted RBP6.4□□□□□ -1.38
CRNDE-208ENST00000560029 FBXO18Q8NFZ0 1043 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 HOXB13Q92826 284 aaPredicted RBP6.4□□□□□ -1.38
CRNDE-208ENST00000560029 NUP88Q99567 741 aaPredicted RBP6.4□□□□□ -1.38
CRNDE-208ENST00000560029 WDR26Q9H7D7 661 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 GPRC5DQ9NZD1 345 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 GPRC5BQ9NZH0 403 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 RCAN3Q9UKA8 241 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 PCDHA13Q9Y5I0 950 aa6.4□□□□□ -1.38
CRNDE-208ENST00000560029 UBE2QL1A1L167 161 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 FAM171A2A8MVW0 826 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 ADCY6O43306 1168 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 POU2F2P09086 479 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 GYPEP15421 78 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 PDCP20941 246 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 CYP2C19P33261 490 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 WASP42768 502 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 PER3P56645 1201 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 MLC1Q15049 377 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 IFIT1BQ5T764 474 aaKnown RBP6.39□□□□□ -1.39
CRNDE-208ENST00000560029 MIGA2Q7L4E1 593 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 C14orf80Q86SX3 495 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 RHOT1Q8IXI2 618 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 CMTM4Q8IZR5 234 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 REPS2Q8NFH8 660 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 OR5M3Q8NGP4 307 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.39□□□□□ -1.39
CRNDE-208ENST00000560029 KAT5Q92993 513 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 RAB24Q969Q5 203 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 HDAC10Q969S8 669 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 UHRF1Q96T88 793 aaPredicted RBP6.39□□□□□ -1.39
CRNDE-208ENST00000560029 C7orf25Q9BPX7 421 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 GTPBP4Q9BZE4 634 aaKnown RBP6.39□□□□□ -1.39
CRNDE-208ENST00000560029 LDAHQ9H6V9 325 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 IL23AQ9NPF7 189 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 TRPS1Q9UHF7 1281 aa6.39□□□□□ -1.39
CRNDE-208ENST00000560029 A0A1W2PRX2 142 aa6.38□□□□□ -1.39
CRNDE-208ENST00000560029 NRP1O14786 923 aa6.38□□□□□ -1.39
CRNDE-208ENST00000560029 AP1G1O43747 822 aa6.38□□□□□ -1.39
CRNDE-208ENST00000560029 AKAP5P24588 427 aa6.38□□□□□ -1.39
CRNDE-208ENST00000560029 SLC6A9P48067 706 aa6.38□□□□□ -1.39
CRNDE-208ENST00000560029 ZNF267Q14586 743 aaPredicted RBP6.38□□□□□ -1.39
CRNDE-208ENST00000560029 TCEAL8Q8IYN2 117 aa6.38□□□□□ -1.39
CRNDE-208ENST00000560029 PQLC1Q8N2U9 271 aa6.38□□□□□ -1.39
CRNDE-208ENST00000560029 MAGEB6Q8N7X4 407 aa6.38□□□□□ -1.39
CRNDE-208ENST00000560029 OR7D4Q8NG98 312 aa6.38□□□□□ -1.39
CRNDE-208ENST00000560029 MDM1Q8TC05 714 aa6.38□□□□□ -1.39
CRNDE-208ENST00000560029 CCHCR1Q8TD31 782 aa6.38□□□□□ -1.39
CRNDE-208ENST00000560029 NRDE2Q9H7Z3 1164 aa6.38□□□□□ -1.39
CRNDE-208ENST00000560029 ANLNQ9NQW6 1124 aa6.38□□□□□ -1.39
CRNDE-208ENST00000560029 SIK3Q9Y2K2 1263 aa6.38□□□□□ -1.39
CRNDE-208ENST00000560029 CYP27B1O15528 508 aa6.37□□□□□ -1.39
CRNDE-208ENST00000560029 ENDOD1O94919 500 aa6.37□□□□□ -1.39
CRNDE-208ENST00000560029 LPOP22079 712 aaPredicted RBP6.37□□□□□ -1.39
CRNDE-208ENST00000560029 SREBF1P36956 1147 aa6.37□□□□□ -1.39
CRNDE-208ENST00000560029 NPEPPSP55786 919 aa6.37□□□□□ -1.39
CRNDE-208ENST00000560029 NXNQ6DKJ4 435 aa6.37□□□□□ -1.39
CRNDE-208ENST00000560029 CXorf57Q6NSI4 855 aaKnown RBP6.37□□□□□ -1.39
CRNDE-208ENST00000560029 USP45Q70EL2 814 aa6.37□□□□□ -1.39
CRNDE-208ENST00000560029 EPM2AIP1Q7L775 607 aaPredicted RBP6.37□□□□□ -1.39
CRNDE-208ENST00000560029 STON2Q8WXE9 905 aa6.37□□□□□ -1.39
CRNDE-208ENST00000560029 AIFM3Q96NN9 605 aa6.37□□□□□ -1.39
CRNDE-208ENST00000560029 CDC5LQ99459 802 aaKnown RBP6.37□□□□□ -1.39
CRNDE-208ENST00000560029 PDCD2LQ9BRP1 358 aa6.37□□□□□ -1.39
CRNDE-208ENST00000560029 ENKD1Q9H0I2 346 aa6.37□□□□□ -1.39
CRNDE-208ENST00000560029 BCO1Q9HAY6 547 aa6.37□□□□□ -1.39
CRNDE-208ENST00000560029 ZMYM3Q14202 1370 aa6.36□□□□□ -1.39
CRNDE-208ENST00000560029 PMS2P1A4D2B8 440 aa6.36□□□□□ -1.39
CRNDE-208ENST00000560029 FAM20BO75063 409 aa6.36□□□□□ -1.39
CRNDE-208ENST00000560029 OFD1O75665 1012 aa6.36□□□□□ -1.39
CRNDE-208ENST00000560029 STC2O76061 302 aa6.36□□□□□ -1.39
CRNDE-208ENST00000560029 HSPA6P17066 643 aa6.36□□□□□ -1.39
CRNDE-208ENST00000560029 ATF3P18847 181 aa6.36□□□□□ -1.39
CRNDE-208ENST00000560029 CRHR1P34998 444 aa6.36□□□□□ -1.39
CRNDE-208ENST00000560029 PTPN7P35236 360 aa6.36□□□□□ -1.39
CRNDE-208ENST00000560029 GTF2H3Q13889 308 aa6.36□□□□□ -1.39
CRNDE-208ENST00000560029 CNGB1Q14028 1251 aaPredicted RBP6.36□□□□□ -1.39
CRNDE-208ENST00000560029 PRAMEF14Q5SWL7 426 aa6.36□□□□□ -1.39
CRNDE-208ENST00000560029 GJC2Q5T442 439 aaPredicted RBP6.36□□□□□ -1.39
CRNDE-208ENST00000560029 VRK3Q8IV63 474 aa6.36□□□□□ -1.39
CRNDE-208ENST00000560029 GRAMD1CQ8IYS0 662 aa6.36□□□□□ -1.39
CRNDE-208ENST00000560029 TRMT2AQ8IZ69 625 aaKnown RBP6.36□□□□□ -1.39
CRNDE-208ENST00000560029 HPS3Q969F9 1004 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms