RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 SMC2O95347 1197 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 CTSHP09668 335 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 RARAP10276 462 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 MUTP22033 750 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 GLRA2P23416 452 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 GUCY2CP25092 1073 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 CST5P28325 142 aaPredicted RBP5.75□□□□□ -1.49
SPG11-220ENST00000559933 HOXD13P35453 343 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 PRCPP42785 496 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 CHRNA4P43681 627 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 GATA4P43694 442 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 PEX3P56589 373 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 NLRP12P59046 1061 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 ZNF445P59923 1031 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 RAC1P63000 192 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 STX1AQ16623 288 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 HERC4Q5GLZ8 1057 aaPredicted RBP5.75□□□□□ -1.49
SPG11-220ENST00000559933 FAM26FQ5R3K3 315 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 ODR4Q5SWX8 454 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 L1TD1Q5T7N2 865 aaKnown RBP5.75□□□□□ -1.49
SPG11-220ENST00000559933 PSAPL1Q6NUJ1 521 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 EFCAB12Q6NXP0 572 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 NFRKBQ6P4R8 1299 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 SASS6Q6UVJ0 657 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 C8orf86Q6ZUL3 223 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 OTUD6AQ7L8S5 288 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 RNF180Q86T96 592 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 LUZP1Q86V48 1076 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 CCDC65Q8IXS2 484 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 AOPEPQ8N6M6 819 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 LINC01465Q8N7H1 131 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 C7orf31Q8N865 590 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 ZSWIM2Q8NEG5 633 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 U2AF1L4Q8WU68 220 aaKnown RBP5.75□□□□□ -1.49
SPG11-220ENST00000559933 NUDT8Q8WV74 236 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 ARMC5Q96C12 935 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 EEF2KMTQ96G04 330 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 FAM167AQ96KS9 214 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 NLRP4Q96MN2 994 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 TRPV6Q9H1D0 765 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 RBSNQ9H1K0 784 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 TSPY26PQ9H489 355 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 SPC25Q9HBM1 224 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 NRBP2Q9NSY0 501 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 SUCLA2Q9P2R7 463 aaPredicted RBP5.75□□□□□ -1.49
SPG11-220ENST00000559933 AKT3Q9Y243 479 aa5.75□□□□□ -1.49
SPG11-220ENST00000559933 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.74□□□□□ -1.49
SPG11-220ENST00000559933 A0A087WZ62 844 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 IGKV6-21A0A0C4DH24 114 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 LRRIQ4A6NIV6 560 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 CCDC169A6NNP5 214 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 KBTBD13C9JR72 458 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 B4GALT5O43286 388 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 ZEB2O60315 1214 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 B4GALT4O60513 344 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 DKC1O60832 514 aaKnown RBP eCLIP5.74□□□□□ -1.49
SPG11-220ENST00000559933 MAP3K6O95382 1288 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 GCNT3O95395 438 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 TFRCP02786 760 aaKnown RBP5.74□□□□□ -1.49
SPG11-220ENST00000559933 FURINP09958 794 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 SRGAP2CP0DJJ0 459 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 CYP2C9P11712 490 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 PLS3P13797 630 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 ARL2P36404 184 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 NPTX2P47972 431 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 SLC26A2P50443 739 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 ZNF131P52739 623 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 NCKAP1LP55160 1127 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 NKX3-2P78367 333 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 ADAM17P78536 824 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 AMPD3Q01432 767 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 LAMTOR4Q0VGL1 99 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 ITGA7Q13683 1181 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 KCNB1Q14721 858 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 PTPN21Q16825 1174 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 KIZQ2M2Z5 673 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 BRDTQ58F21 947 aaPredicted RBP5.74□□□□□ -1.49
SPG11-220ENST00000559933 ZNF484Q5JVG2 852 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 ZNF658Q5TYW1 1059 aaPredicted RBP5.74□□□□□ -1.49
SPG11-220ENST00000559933 CNNM4Q6P4Q7 775 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 FAM35AQ86V20 835 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 CDR2LQ86X02 465 aaPredicted RBP5.74□□□□□ -1.49
SPG11-220ENST00000559933 TREML1Q86YW5 311 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 RHPN2Q8IUC4 686 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 DHX40Q8IX18 779 aaKnown RBP5.74□□□□□ -1.49
SPG11-220ENST00000559933 ELOA2Q8IYF1 753 aaPredicted RBP5.74□□□□□ -1.49
SPG11-220ENST00000559933 SCFD1Q8WVM8 642 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 DNAJB3Q8WWF6 145 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 PRPF31Q8WWY3 499 aaKnown RBP5.74□□□□□ -1.49
SPG11-220ENST00000559933 NELFBQ8WX92 580 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 SLC7A3Q8WY07 619 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 FAM84AQ96KN4 292 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 GSDMAQ96QA5 445 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 FDXACB1Q9BRP7 624 aaPredicted RBP5.74□□□□□ -1.49
SPG11-220ENST00000559933 KATNAL1Q9BW62 490 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 SENP6Q9GZR1 1112 aaPredicted RBP5.74□□□□□ -1.49
SPG11-220ENST00000559933 MINDY3Q9H8M7 445 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 MRPL44Q9H9J2 332 aaKnown RBP5.74□□□□□ -1.49
SPG11-220ENST00000559933 PARVGQ9HBI0 331 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 CBX8Q9HC52 389 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms