RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 MRPL17Q9NRX2 175 aaKnown RBP12□□□□□ -0.49
SPG11-216ENST00000559347 TOPORSQ9NS56 1045 aaPredicted RBP12□□□□□ -0.49
SPG11-216ENST00000559347 CCDC39Q9UFE4 941 aa12□□□□□ -0.49
SPG11-216ENST00000559347 A0A087X0B3 334 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 C2CD2LO14523 706 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 SPTLC2O15270 562 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 YEATS4O95619 227 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 CNPP09543 421 aaKnown RBP11.99□□□□□ -0.49
SPG11-216ENST00000559347 HARSP12081 509 aaKnown RBP11.99□□□□□ -0.49
SPG11-216ENST00000559347 PDIA4P13667 645 aaKnown RBP11.99□□□□□ -0.49
SPG11-216ENST00000559347 HOXB8P17481 243 aaPredicted RBP11.99□□□□□ -0.49
SPG11-216ENST00000559347 DDIT3P35638 169 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 CLCN4P51793 760 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 YARSP54577 528 aaKnown RBP11.99□□□□□ -0.49
SPG11-216ENST00000559347 OSTNP61366 133 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 DSG1Q02413 1049 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 XKR4Q5GH76 650 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 FOXD4L5Q5VV16 416 aaPredicted RBP11.99□□□□□ -0.49
SPG11-216ENST00000559347 ZBTB33Q86T24 672 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 MYCT1Q8N699 235 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 HASPINQ8TF76 798 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 SLC22A17Q8WUG5 538 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 FOXD4L4Q8WXT5 416 aaPredicted RBP11.99□□□□□ -0.49
SPG11-216ENST00000559347 ZBTB45Q96K62 511 aaPredicted RBP11.99□□□□□ -0.49
SPG11-216ENST00000559347 B3GALT6Q96L58 329 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 ZNF396Q96N95 335 aaPredicted RBP11.99□□□□□ -0.49
SPG11-216ENST00000559347 KLHL5Q96PQ7 755 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 EMILIN2Q9BXX0 1053 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 GPR62Q9BZJ7 368 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 HAPLN2Q9GZV7 340 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 S1PR5Q9H228 398 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 CHST7Q9NS84 486 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 DZANK1Q9NVP4 752 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 CNTN3Q9P232 1028 aa11.99□□□□□ -0.49
SPG11-216ENST00000559347 SF3B1O75533 1304 aaKnown RBP eCLIP11.99□□□□□ -0.49
SPG11-216ENST00000559347 TMEM189-UBE2V1I3L0A0 370 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 HNRNPDLO14979 420 aaKnown RBP11.98□□□□□ -0.49
SPG11-216ENST00000559347 MEFVO15553 781 aaPredicted RBP11.98□□□□□ -0.49
SPG11-216ENST00000559347 TRAK2O60296 914 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 PPP6R2O75170 966 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 PIGRP01833 764 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 SCP2P22307 547 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 SOX4Q06945 474 aaPredicted RBP11.98□□□□□ -0.49
SPG11-216ENST00000559347 MCL1Q07820 350 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 CBX2Q14781 532 aaPredicted RBP11.98□□□□□ -0.49
SPG11-216ENST00000559347 TPRNQ4KMQ1 711 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 KIAA0319Q5VV43 1072 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 RRAGBQ5VZM2 374 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 ALKAL1Q6UXT8 129 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 CCDC73Q6ZRK6 1079 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 PPFIBP1Q86W92 1011 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 MAP4K3Q8IVH8 894 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 TMEM87AQ8NBN3 555 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 SPRYD3Q8NCJ5 442 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 BICD1Q96G01 975 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 TCHPQ9BT92 498 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 APOL5Q9BWW9 433 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 GOLGA2P5Q9HBQ8 144 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 CDH22Q9UJ99 828 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 TBX20Q9UMR3 447 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 SSX2IPQ9Y2D8 614 aa11.98□□□□□ -0.49
SPG11-216ENST00000559347 SMIM28A0A1B0GU29 152 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 MYMKA6NI61 221 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 TEX28O15482 410 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 ADH1AP07327 375 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 KLRC2P26717 231 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 NMT1P30419 496 aaKnown RBP11.97□□□□□ -0.49
SPG11-216ENST00000559347 STAT6P42226 847 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 LIG4P49917 911 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 CLCNKBP51801 687 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 GTF2BQ00403 316 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 ITIH3Q06033 890 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 USP41Q3LFD5 358 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 SEZ6Q53EL9 994 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 RTP2Q5QGT7 225 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 SLC39A4Q6P5W5 647 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 DYMQ7RTS9 669 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 SFR1Q86XK3 245 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 GPR65Q8IYL9 337 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 C3orf58Q8NDZ4 430 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 DDX12PQ92771 950 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 DNAJC19Q96DA6 116 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 FBXL18Q96ME1 805 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 UROC1Q96N76 676 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 ZMAT2Q96NC0 199 aaKnown RBP11.97□□□□□ -0.49
SPG11-216ENST00000559347 ACAP3Q96P50 834 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 PHF7Q9BWX1 381 aaPredicted RBP11.97□□□□□ -0.49
SPG11-216ENST00000559347 ST6GALNAC4Q9H4F1 302 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 ZHX3Q9H4I2 956 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 SFXN1Q9H9B4 322 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 RXFP1Q9HBX9 757 aa11.97□□□□□ -0.49
SPG11-216ENST00000559347 TFIP11Q9UBB9 837 aaKnown RBP11.97□□□□□ -0.49
SPG11-216ENST00000559347 LOC730098B7Z3J9 87 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 CLDN3O15551 220 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 FAM189A1O60320 539 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 CUTAO60888 179 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 TADA2AO75478 443 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 PPP1R37O75864 691 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 CXCL8P10145 99 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 KCNE1P15382 129 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms