RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 CCDC39Q9UFE4 941 aa19.29■□□□□ 0.68
SMAD3-210ENST00000559092 GTF3C3Q9Y5Q9 886 aa19.29■□□□□ 0.68
SMAD3-210ENST00000559092 SMIM28A0A1B0GU29 152 aa19.28■□□□□ 0.68
SMAD3-210ENST00000559092 CASTOR2A6NHX0 329 aa19.28■□□□□ 0.68
SMAD3-210ENST00000559092 MARCKSP29966 332 aaPredicted RBP19.28■□□□□ 0.68
SMAD3-210ENST00000559092 NCKAP1LP55160 1127 aa19.28■□□□□ 0.68
SMAD3-210ENST00000559092 MCM6Q14566 821 aa19.28■□□□□ 0.68
SMAD3-210ENST00000559092 SLC39A14Q15043 492 aa19.28■□□□□ 0.68
SMAD3-210ENST00000559092 RARS2Q5T160 578 aaKnown RBP19.28■□□□□ 0.68
SMAD3-210ENST00000559092 FAM173BQ6P4H8 233 aa19.28■□□□□ 0.68
SMAD3-210ENST00000559092 DCLRE1AQ6PJP8 1040 aa19.28■□□□□ 0.68
SMAD3-210ENST00000559092 HAUS6Q7Z4H7 955 aa19.28■□□□□ 0.68
SMAD3-210ENST00000559092 MYCT1Q8N699 235 aa19.28■□□□□ 0.68
SMAD3-210ENST00000559092 C12orf76Q8N812 135 aaPredicted RBP19.28■□□□□ 0.68
SMAD3-210ENST00000559092 CMASQ8NFW8 434 aaPredicted RBP19.28■□□□□ 0.68
SMAD3-210ENST00000559092 LRRC15Q8TF66 581 aa19.28■□□□□ 0.68
SMAD3-210ENST00000559092 LARP4BQ92615 738 aaKnown RBP19.28■□□□□ 0.68
SMAD3-210ENST00000559092 RABGGTAQ92696 567 aa19.28■□□□□ 0.68
SMAD3-210ENST00000559092 LRFN3Q9BTN0 628 aa19.28■□□□□ 0.68
SMAD3-210ENST00000559092 CXCL16Q9H2A7 254 aa19.28■□□□□ 0.68
SMAD3-210ENST00000559092 C11orf16Q9NQ32 467 aa19.28■□□□□ 0.68
SMAD3-210ENST00000559092 FOXD4L1Q9NU39 408 aa19.28■□□□□ 0.68
SMAD3-210ENST00000559092 SLC38A7Q9NVC3 462 aa19.28■□□□□ 0.68
SMAD3-210ENST00000559092 NR2E1Q9Y466 385 aa19.28■□□□□ 0.68
SMAD3-210ENST00000559092 TMEM189-UBE2V1I3L0A0 370 aa19.27■□□□□ 0.68
SMAD3-210ENST00000559092 CLDN3O15551 220 aa19.27■□□□□ 0.68
SMAD3-210ENST00000559092 FAM13AO94988 1023 aa19.27■□□□□ 0.68
SMAD3-210ENST00000559092 GLUD1P00367 558 aa19.27■□□□□ 0.68
SMAD3-210ENST00000559092 KRT18P05783 430 aaKnown RBP19.27■□□□□ 0.68
SMAD3-210ENST00000559092 KCNE1P15382 129 aa19.27■□□□□ 0.68
SMAD3-210ENST00000559092 TXLNAP40222 546 aa19.27■□□□□ 0.68
SMAD3-210ENST00000559092 MCL1Q07820 350 aa19.27■□□□□ 0.68
SMAD3-210ENST00000559092 DHX8Q14562 1220 aaKnown RBP19.27■□□□□ 0.68
SMAD3-210ENST00000559092 PDXDC1Q6P996 788 aa19.27■□□□□ 0.68
SMAD3-210ENST00000559092 CYP26C1Q6V0L0 522 aa19.27■□□□□ 0.68
SMAD3-210ENST00000559092 C15orf39Q6ZRI6 1047 aa19.27■□□□□ 0.68
SMAD3-210ENST00000559092 ZBTB33Q86T24 672 aa19.27■□□□□ 0.68
SMAD3-210ENST00000559092 HSCBQ8IWL3 235 aa19.27■□□□□ 0.68
SMAD3-210ENST00000559092 RIN2Q8WYP3 895 aaPredicted RBP19.27■□□□□ 0.68
SMAD3-210ENST00000559092 DDX27Q96GQ7 796 aaKnown RBP19.27■□□□□ 0.68
SMAD3-210ENST00000559092 TTPALQ9BTX7 342 aa19.27■□□□□ 0.68
SMAD3-210ENST00000559092 RHOBTB2Q9BYZ6 727 aa19.27■□□□□ 0.68
SMAD3-210ENST00000559092 STK17AQ9UEE5 414 aa19.27■□□□□ 0.68
SMAD3-210ENST00000559092 PRR33A8MZF0 331 aa19.26■□□□□ 0.67
SMAD3-210ENST00000559092 KIF4AO95239 1232 aa19.26■□□□□ 0.67
SMAD3-210ENST00000559092 COL9A1P20849 921 aa19.26■□□□□ 0.67
SMAD3-210ENST00000559092 CACNB1Q02641 598 aaPredicted RBP19.26■□□□□ 0.67
SMAD3-210ENST00000559092 NOLC1Q14978 699 aaKnown RBP eCLIP19.26■□□□□ 0.67
SMAD3-210ENST00000559092 KYAT1Q16773 422 aa19.26■□□□□ 0.67
SMAD3-210ENST00000559092 UPP1Q16831 310 aa19.26■□□□□ 0.67
SMAD3-210ENST00000559092 FAM171A1Q5VUB5 890 aa19.26■□□□□ 0.67
SMAD3-210ENST00000559092 USP49Q70CQ1 688 aa19.26■□□□□ 0.67
SMAD3-210ENST00000559092 GPR149Q86SP6 731 aa19.26■□□□□ 0.67
SMAD3-210ENST00000559092 CEP120Q8N960 986 aa19.26■□□□□ 0.67
SMAD3-210ENST00000559092 KRI1Q8N9T8 703 aaKnown RBP19.26■□□□□ 0.67
SMAD3-210ENST00000559092 ZBTB45Q96K62 511 aaPredicted RBP19.26■□□□□ 0.67
SMAD3-210ENST00000559092 USP28Q96RU2 1077 aa19.26■□□□□ 0.67
SMAD3-210ENST00000559092 PLEKHA4Q9H4M7 779 aa19.26■□□□□ 0.67
SMAD3-210ENST00000559092 CACNG4Q9UBN1 327 aa19.26■□□□□ 0.67
SMAD3-210ENST00000559092 MUTYHQ9UIF7 546 aa19.26■□□□□ 0.67
SMAD3-210ENST00000559092 TBX20Q9UMR3 447 aa19.26■□□□□ 0.67
SMAD3-210ENST00000559092 SPDYE4A6NLX3 237 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 TRAPPC3O43617 180 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 TRAK2O60296 914 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 TBCAO75347 108 aaKnown RBP19.25■□□□□ 0.67
SMAD3-210ENST00000559092 B3GAT3O94766 335 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 NASPP49321 788 aaPredicted RBP19.25■□□□□ 0.67
SMAD3-210ENST00000559092 OSTNP61366 133 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 CEBPZQ03701 1054 aaKnown RBP19.25■□□□□ 0.67
SMAD3-210ENST00000559092 GLRA4Q5JXX5 417 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 SPECC1Q5M775 1068 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 RTP2Q5QGT7 225 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 RRAGBQ5VZM2 374 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 TMC5Q6UXY8 1006 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 PIK3R5Q8WYR1 880 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 EDAQ92838 391 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 B3GALT6Q96L58 329 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 SNX27Q96L92 541 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 CLIC6Q96NY7 704 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 POMKQ9H5K3 350 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 PLEKHA5Q9HAU0 1116 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 MAN1C1Q9NR34 630 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 CNTN3Q9P232 1028 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 USTQ9Y2C2 406 aa19.25■□□□□ 0.67
SMAD3-210ENST00000559092 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.25■□□□□ 0.67
SMAD3-210ENST00000559092 PAPLNO95428 1278 aa19.24■□□□□ 0.67
SMAD3-210ENST00000559092 PIGRP01833 764 aa19.24■□□□□ 0.67
SMAD3-210ENST00000559092 RPL9P32969 192 aaKnown RBP19.24■□□□□ 0.67
SMAD3-210ENST00000559092 CLCNKBP51801 687 aa19.24■□□□□ 0.67
SMAD3-210ENST00000559092 LILRA6Q6PI73 481 aa19.24■□□□□ 0.67
SMAD3-210ENST00000559092 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.24■□□□□ 0.67
SMAD3-210ENST00000559092 CCDC73Q6ZRK6 1079 aa19.24■□□□□ 0.67
SMAD3-210ENST00000559092 HASPINQ8TF76 798 aa19.24■□□□□ 0.67
SMAD3-210ENST00000559092 BICD1Q96G01 975 aa19.24■□□□□ 0.67
SMAD3-210ENST00000559092 ZNF396Q96N95 335 aaPredicted RBP19.24■□□□□ 0.67
SMAD3-210ENST00000559092 ANKFY1Q9P2R3 1169 aa19.24■□□□□ 0.67
SMAD3-210ENST00000559092 FAM86C2PA6NEL3 165 aa19.23■□□□□ 0.67
SMAD3-210ENST00000559092 TGM5O43548 720 aa19.23■□□□□ 0.67
SMAD3-210ENST00000559092 HSP90AA1P07900 732 aaKnown RBP19.23■□□□□ 0.67
SMAD3-210ENST00000559092 CLTAP09496 248 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms