RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 SPATA6Q9NWH7 488 aaPredicted RBP12.42□□□□□ -0.42
CHRNA3-205ENST00000559080 FNIP2Q9P278 1114 aa12.42□□□□□ -0.42
CHRNA3-205ENST00000559080 NCDNQ9UBB6 729 aa12.42□□□□□ -0.42
CHRNA3-205ENST00000559080 IPPQ9Y573 584 aa12.42□□□□□ -0.42
CHRNA3-205ENST00000559080 PCDHGA2Q9Y5H1 932 aa12.42□□□□□ -0.42
CHRNA3-205ENST00000559080 ZFP37Q9Y6Q3 630 aaPredicted RBP12.42□□□□□ -0.42
CHRNA3-205ENST00000559080 CNOT1A5YKK6 2376 aaKnown RBP12.42□□□□□ -0.42
CHRNA3-205ENST00000559080 SPAG17Q6Q759 2223 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 CACNA1GO43497 2377 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 ARL5CA6NH57 179 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 LAMTOR5O43504 91 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 USO1O60763 962 aaKnown RBP12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 RPL17P18621 184 aaKnown RBP12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 SDHBP21912 280 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 MLH1P40692 756 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 MLF2Q15773 248 aaPredicted RBP12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 SLC44A4Q53GD3 710 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 FUT10Q6P4F1 479 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 CNNM3Q8NE01 707 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 PIGOQ8TEQ8 1089 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 TMX3Q96JJ7 454 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 ZFP42Q96MM3 310 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 EIF2AQ9BY44 585 aaKnown RBP12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 BCO2Q9BYV7 579 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 OSBPL6Q9BZF3 934 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 EPC1Q9H2F5 836 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 XPNPEP1Q9NQW7 623 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 HES2Q9Y543 173 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 GREB1Q4ZG55 1949 aa12.41□□□□□ -0.42
CHRNA3-205ENST00000559080 DCDC2BA2VCK2 349 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 SHISA7A6NL88 538 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 H3BQV1 296 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 MED24O75448 989 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 XRCC6P12956 609 aaKnown RBP eCLIP12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 ITGA4P13612 1032 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 CD72P21854 359 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 FSHRP23945 695 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 U2AF2P26368 475 aaKnown RBP eCLIP12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 SCNN1GP51170 649 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 NTHL1P78549 312 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 PRKCQQ04759 706 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 CSTF1Q05048 431 aaKnown RBP12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 NCBP1Q09161 790 aaKnown RBP12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 FZD5Q13467 585 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 NBR1Q14596 966 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 PCBP1Q15365 356 aaKnown RBP eCLIP12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 MCTP1Q6DN14 999 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 GRASPQ7Z6J2 395 aaPredicted RBP12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 MCPH1Q8NEM0 835 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 NACC1Q96RE7 527 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 POLR3CQ9BUI4 534 aaPredicted RBP12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 RAB34Q9BZG1 259 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 PARD6AQ9NPB6 346 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 LTB4R2Q9NPC1 389 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 UBN1Q9NPG3 1134 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 FBXW11Q9UKB1 542 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 CDH7Q9ULB5 785 aa12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 SMG5Q9UPR3 1016 aaKnown RBP12.4□□□□□ -0.42
CHRNA3-205ENST00000559080 FAM170BA6NMN3 283 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 PRR5-ARHGAP8B1AHC4 643 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 INO80B-WBP1J3KQ70 363 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 CD2BP2O95400 341 aaKnown RBP12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 ADRB1P08588 477 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 SPATA31C1P0DKV0 1188 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 TARSP26639 723 aaKnown RBP12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 RPA1P27694 616 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 GJB2P29033 226 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 ARHGAP8P85298 464 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 LMNB2Q03252 620 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 CAPSQ13938 189 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 UBXN2BQ14CS0 331 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 USP41Q3LFD5 358 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 TSSK4Q6SA08 328 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 PRSS55Q6UWB4 352 aaPredicted RBP12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 RSPO2Q6UXX9 243 aaPredicted RBP12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 CATSPER3Q86XQ3 398 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 ASAP3Q8TDY4 903 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 ATRIPQ8WXE1 791 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 FGF13Q92913 245 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 CLDN23Q96B33 292 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 CCDC51Q96ER9 411 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 RTKNQ9BST9 563 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 COLEC11Q9BWP8 271 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 POLR3FQ9H1D9 316 aaPredicted RBP12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 ZSCAN32Q9NX65 697 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 ADAM28Q9UKQ2 775 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 CDV3Q9UKY7 258 aaKnown RBP12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 SMC3Q9UQE7 1217 aa12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.39□□□□□ -0.43
CHRNA3-205ENST00000559080 ZFHX4Q86UP3 3567 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 CHD6Q8TD26 2715 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 ARHGEF35A5YM69 484 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 LAD1O00515 517 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 TSPAN1O60635 241 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 MUTP22033 750 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 AXLP30530 894 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 ARL2P36404 184 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 CCT6AP40227 531 aaKnown RBP12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 MAGEA9P43362 315 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms