RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 NFRKBQ6P4R8 1299 aa7.08□□□□□ -1.28
ZEB1-211ENST00000558440 SPOCD1Q6ZMY3 1216 aa7.08□□□□□ -1.28
ZEB1-211ENST00000558440 KCTD1Q719H9 257 aa7.08□□□□□ -1.28
ZEB1-211ENST00000558440 LILRA2Q8N149 483 aa7.08□□□□□ -1.28
ZEB1-211ENST00000558440 OXR1Q8N573 874 aa7.08□□□□□ -1.28
ZEB1-211ENST00000558440 ENOX1Q8TC92 643 aaKnown RBP7.08□□□□□ -1.28
ZEB1-211ENST00000558440 APPBP2Q92624 585 aa7.08□□□□□ -1.28
ZEB1-211ENST00000558440 OSBP2Q969R2 916 aa7.08□□□□□ -1.28
ZEB1-211ENST00000558440 GPATCH3Q96I76 525 aa7.08□□□□□ -1.28
ZEB1-211ENST00000558440 MPHOSPH6Q99547 160 aaKnown RBP7.08□□□□□ -1.28
ZEB1-211ENST00000558440 LRRCC1Q9C099 1032 aa7.08□□□□□ -1.28
ZEB1-211ENST00000558440 RNF32Q9H0A6 362 aa7.08□□□□□ -1.28
ZEB1-211ENST00000558440 EPB41L4AQ9HCS5 686 aaPredicted RBP7.08□□□□□ -1.28
ZEB1-211ENST00000558440 DDX19BQ9UMR2 479 aa7.08□□□□□ -1.28
ZEB1-211ENST00000558440 STX8Q9UNK0 236 aa7.08□□□□□ -1.28
ZEB1-211ENST00000558440 CFAP54Q96N23 3096 aa7.08□□□□□ -1.28
ZEB1-211ENST00000558440 RALGAPA2Q2PPJ7 1873 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 LOC102724159A0A0B4J2E5 919 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 PTPDC1A2A3K4 754 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 PI4K2BG5E9Z4 385 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 NKRFO15226 690 aaKnown RBP eCLIP7.07□□□□□ -1.284e-7■■■□□ 16
ZEB1-211ENST00000558440 RNF113AO15541 343 aaKnown RBP7.07□□□□□ -1.28
ZEB1-211ENST00000558440 KPNA6O60684 536 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 KRT1P04264 644 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 ICAM1P05362 532 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 NMIQ13287 307 aaPredicted RBP7.07□□□□□ -1.28
ZEB1-211ENST00000558440 PPP2R5BQ15173 497 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 PWP2Q15269 919 aaKnown RBP7.07□□□□□ -1.28
ZEB1-211ENST00000558440 NR0B2Q15466 257 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 CCDC96Q2M329 555 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 LRRFIP1Q32MZ4 808 aaKnown RBP7.07□□□□□ -1.28
ZEB1-211ENST00000558440 CDCP2Q5VXM1 449 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 RCSD1Q6JBY9 416 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 SIRT2Q8IXJ6 389 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 IFNL3Q8IZI9 196 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 KBTBD3Q8NAB2 608 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 SYTL5Q8TDW5 730 aaPredicted RBP7.07□□□□□ -1.28
ZEB1-211ENST00000558440 MORC4Q8TE76 937 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 GDPD5Q8WTR4 605 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 HDAC8Q9BY41 377 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.07□□□□□ -1.287e-8■■■■□ 20.9
ZEB1-211ENST00000558440 NAPBQ9H115 298 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 CHMP4BQ9H444 224 aaKnown RBP7.07□□□□□ -1.28
ZEB1-211ENST00000558440 ECHDC1Q9NTX5 307 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 UBP1Q9NZI7 540 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 ATG2AQ2TAZ0 1938 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 SPTBN4Q9H254 2564 aa7.07□□□□□ -1.28
ZEB1-211ENST00000558440 TSPY2A6NKD2 308 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 B4DLN1 442 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 M0R2C6 588 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 SMARCA5O60264 1052 aaPredicted RBP7.06□□□□□ -1.28
ZEB1-211ENST00000558440 LPXNO60711 386 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 CALML3P27482 149 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 MRPL12P52815 198 aaKnown RBP7.06□□□□□ -1.28
ZEB1-211ENST00000558440 WDR5P61964 334 aaKnown RBP7.06□□□□□ -1.28
ZEB1-211ENST00000558440 PPARAQ07869 468 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 DUSP4Q13115 394 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 BAATQ14032 418 aaPredicted RBP7.06□□□□□ -1.28
ZEB1-211ENST00000558440 PTGISQ16647 500 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 SEZ6Q53EL9 994 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 REXO1Q8N1G1 1221 aaKnown RBP7.06□□□□□ -1.28
ZEB1-211ENST00000558440 CAGE1Q8TC20 777 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 AFAP1L1Q8TED9 768 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 SCFD2Q8WU76 684 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 DCAF4Q8WV16 495 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 UIMC1Q96RL1 719 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 TGS1Q96RS0 853 aaKnown RBP7.06□□□□□ -1.28
ZEB1-211ENST00000558440 CRBNQ96SW2 442 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 UBE2ZQ9H832 354 aaPredicted RBP7.06□□□□□ -1.28
ZEB1-211ENST00000558440 CNNM2Q9H8M5 875 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 ZBTB40Q9NUA8 1239 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 MTUS1Q9ULD2 1270 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 ZNF281Q9Y2X9 895 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 ZDBF2Q9HCK1 2354 aa7.06□□□□□ -1.28
ZEB1-211ENST00000558440 LCHNA4D1U4 455 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 NFIBO00712 420 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 PARNO95453 639 aaKnown RBP7.05□□□□□ -1.28
ZEB1-211ENST00000558440 C1QTNF9P0C862 333 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 TXNP10599 105 aaKnown RBP7.05□□□□□ -1.28
ZEB1-211ENST00000558440 ALADP13716 330 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 KCNA5P22460 613 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 POLR2BP30876 1174 aaKnown RBP7.05□□□□□ -1.28
ZEB1-211ENST00000558440 CHRNEQ04844 493 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 CLCQ05315 142 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 RAD51AP2Q09MP3 1159 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 APOBRQ0VD83 1088 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 KRTAP19-4Q3LI73 84 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 TIGD5Q53EQ6 642 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 CNKSR3Q6P9H4 555 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 SLC30A10Q6XR72 485 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 RNF207Q6ZRF8 634 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 ANKS4BQ8N8V4 417 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 DAGLBQ8NCG7 672 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 RAD9AQ99638 391 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 NT5C1AQ9BXI3 368 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 KRTAP4-5Q9BYR2 181 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 RANBP17Q9H2T7 1088 aaKnown RBP7.05□□□□□ -1.28
ZEB1-211ENST00000558440 KCNK12Q9HB15 430 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 CD320Q9NPF0 282 aa7.05□□□□□ -1.28
ZEB1-211ENST00000558440 EBF1Q9UH73 591 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms