RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 TCHPQ9BT92 498 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 NUP85Q9BW27 656 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 TRIM7Q9C029 511 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 NEUROG2Q9H2A3 272 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 VIPAS39Q9H9C1 493 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 C1orf112Q9NSG2 853 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 NOP56O00567 594 aaKnown RBP11.35□□□□□ -0.59
TPM1-210ENST00000558264 SOCS7O14512 581 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 VNN1O95497 513 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 EDNRBP24530 442 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 NAMPTP43490 491 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 RTP1P59025 263 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 OSTNP61366 133 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 EFCC1Q9HA90 598 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 CENPFP49454 3210 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 IGKV6D-21A0A0A0MT36 114 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 CSDE1O75534 798 aaKnown RBP11.34□□□□□ -0.59
TPM1-210ENST00000558264 KRT14P02533 472 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 NF2P35240 595 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 AARSP49588 968 aaKnown RBP eCLIP11.34□□□□□ -0.59
TPM1-210ENST00000558264 CDR2Q01850 454 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 PAK2Q13177 524 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 FMNL3Q8IVF7 1028 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 RHOT2Q8IXI1 618 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 SEPT1Q8WYJ6 367 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 DDX1Q92499 740 aaKnown RBP11.34□□□□□ -0.59
TPM1-210ENST00000558264 AZI2Q9H6S1 392 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 APOBEC3GQ9HC16 384 aaKnown RBP11.34□□□□□ -0.59
TPM1-210ENST00000558264 MED4Q9NPJ6 270 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 AGTPBP1Q9UPW5 1226 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 SPDYE5A6NIY4 337 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 DAPK3O43293 454 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 GJA5P36382 358 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 IGBP1P78318 339 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 NEDD9Q14511 834 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 KCTD2Q14681 263 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 EMBQ6PCB8 327 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 METTL7BQ6UX53 244 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 USP37Q86T82 979 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 RASGEF1CQ8N431 466 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 RNF149Q8NC42 400 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 ZNF564Q8TBZ8 553 aaPredicted RBP11.34□□□□□ -0.59
TPM1-210ENST00000558264 NLRP4Q96MN2 994 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 SPATA33Q96N06 139 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 ZIM3Q96PE6 472 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 MMP19Q99542 508 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 NRBP2Q9NSY0 501 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 TRPC6Q9Y210 931 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 MCM3APO60318 1980 aa11.34□□□□□ -0.59
TPM1-210ENST00000558264 TCRBV7S2A1N4TA0A589 114 aa11.33□□□□□ -0.59
TPM1-210ENST00000558264 CES2O00748 559 aa11.33□□□□□ -0.59
TPM1-210ENST00000558264 C4BPAP04003 597 aaKnown RBP11.33□□□□□ -0.59
TPM1-210ENST00000558264 FLT3P36888 993 aa11.33□□□□□ -0.59
TPM1-210ENST00000558264 PSMD6Q15008 389 aa11.33□□□□□ -0.59
TPM1-210ENST00000558264 TARBP2Q15633 366 aaKnown RBP11.33□□□□□ -0.59
TPM1-210ENST00000558264 SKIDA1Q1XH10 827 aa11.33□□□□□ -0.59
TPM1-210ENST00000558264 FAM160B1Q5W0V3 765 aa11.33□□□□□ -0.59
TPM1-210ENST00000558264 KCTD16Q68DU8 428 aa11.33□□□□□ -0.59
TPM1-210ENST00000558264 RHPN2Q8IUC4 686 aa11.33□□□□□ -0.59
TPM1-210ENST00000558264 ARL8AQ96BM9 186 aa11.33□□□□□ -0.59
TPM1-210ENST00000558264 SYT17Q9BSW7 474 aa11.33□□□□□ -0.59
TPM1-210ENST00000558264 NIFKQ9BYG3 293 aaKnown RBP11.33□□□□□ -0.59
TPM1-210ENST00000558264 DICER1Q9UPY3 1922 aaKnown RBP11.33□□□□□ -0.6
TPM1-210ENST00000558264 PMM2O15305 246 aa11.33□□□□□ -0.6
TPM1-210ENST00000558264 SPOPO43791 374 aa11.33□□□□□ -0.6
TPM1-210ENST00000558264 GRIN3BO60391 1043 aa11.33□□□□□ -0.6
TPM1-210ENST00000558264 POTEJP0CG39 1038 aa11.33□□□□□ -0.6
TPM1-210ENST00000558264 EPHX2P34913 555 aa11.33□□□□□ -0.6
TPM1-210ENST00000558264 MOGSQ13724 837 aa11.33□□□□□ -0.6
TPM1-210ENST00000558264 ZACNQ401N2 412 aa11.33□□□□□ -0.6
TPM1-210ENST00000558264 WDR44Q5JSH3 913 aa11.33□□□□□ -0.6
TPM1-210ENST00000558264 TTC19Q6DKK2 380 aaPredicted RBP11.33□□□□□ -0.6
TPM1-210ENST00000558264 TMEM270Q6UE05 265 aa11.33□□□□□ -0.6
TPM1-210ENST00000558264 C15orf39Q6ZRI6 1047 aa11.33□□□□□ -0.6
TPM1-210ENST00000558264 SH2D3CQ8N5H7 860 aa11.33□□□□□ -0.6
TPM1-210ENST00000558264 MSL3Q8N5Y2 521 aaKnown RBP11.33□□□□□ -0.6
TPM1-210ENST00000558264 GPR20Q99678 358 aa11.33□□□□□ -0.6
TPM1-210ENST00000558264 CNOT8Q9UFF9 292 aaKnown RBP11.33□□□□□ -0.6
TPM1-210ENST00000558264 ATP8B3O60423 1300 aa11.33□□□□□ -0.6
TPM1-210ENST00000558264 LOC285556D6RIA3 1793 aa11.33□□□□□ -0.6
TPM1-210ENST00000558264 A0A0B4J269 797 aa11.32□□□□□ -0.6
TPM1-210ENST00000558264 H0YCG3 227 aa11.32□□□□□ -0.6
TPM1-210ENST00000558264 CLDN3O15551 220 aa11.32□□□□□ -0.6
TPM1-210ENST00000558264 B4GALT5O43286 388 aa11.32□□□□□ -0.6
TPM1-210ENST00000558264 HSF2BPO75031 334 aa11.32□□□□□ -0.6
TPM1-210ENST00000558264 GJB6O95452 261 aa11.32□□□□□ -0.6
TPM1-210ENST00000558264 CAPN2P17655 700 aa11.32□□□□□ -0.6
TPM1-210ENST00000558264 ECHS1P30084 290 aa11.32□□□□□ -0.6
TPM1-210ENST00000558264 CLCN3P51790 818 aa11.32□□□□□ -0.6
TPM1-210ENST00000558264 ZNF394Q53GI3 561 aa11.32□□□□□ -0.6
TPM1-210ENST00000558264 DHX37Q8IY37 1157 aaKnown RBP11.32□□□□□ -0.6
TPM1-210ENST00000558264 CEP120Q8N960 986 aa11.32□□□□□ -0.6
TPM1-210ENST00000558264 OR2W6PQ8NHA6 318 aa11.32□□□□□ -0.6
TPM1-210ENST00000558264 CAVIN3Q969G5 261 aa11.32□□□□□ -0.6
TPM1-210ENST00000558264 RUFY1Q96T51 708 aa11.32□□□□□ -0.6
TPM1-210ENST00000558264 TAF1DQ9H5J8 278 aaPredicted RBP11.32□□□□□ -0.6
TPM1-210ENST00000558264 RABEP2Q9H5N1 569 aa11.32□□□□□ -0.6
TPM1-210ENST00000558264 DAAM1Q9Y4D1 1078 aa11.32□□□□□ -0.6
TPM1-210ENST00000558264 NUB1Q9Y5A7 615 aa11.32□□□□□ -0.6
TPM1-210ENST00000558264 PCDHB4Q9Y5E5 795 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms