RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 STRN3Q13033 797 aa17.41■□□□□ 0.38
SHMT2-232ENST00000557487 NR1H3Q13133 447 aa17.41■□□□□ 0.38
SHMT2-232ENST00000557487 NUGGCQ68CJ6 796 aa17.41■□□□□ 0.38
SHMT2-232ENST00000557487 ZFPM1Q8IX07 1006 aa17.41■□□□□ 0.38
SHMT2-232ENST00000557487 LXNQ9BS40 222 aa17.41■□□□□ 0.38
SHMT2-232ENST00000557487 ZNF577Q9BSK1 485 aa17.41■□□□□ 0.38
SHMT2-232ENST00000557487 AAASQ9NRG9 546 aa17.41■□□□□ 0.38
SHMT2-232ENST00000557487 FGFR1OP2Q9NVK5 253 aa17.41■□□□□ 0.38
SHMT2-232ENST00000557487 NKIRAS1Q9NYS0 192 aa17.41■□□□□ 0.38
SHMT2-232ENST00000557487 KLHL14Q9P2G3 628 aa17.41■□□□□ 0.38
SHMT2-232ENST00000557487 ASIC3Q9UHC3 531 aa17.41■□□□□ 0.38
SHMT2-232ENST00000557487 CDH16O75309 829 aa17.4■□□□□ 0.38
SHMT2-232ENST00000557487 SGPL1O95470 568 aa17.4■□□□□ 0.38
SHMT2-232ENST00000557487 SNAP25P60880 206 aa17.4■□□□□ 0.38
SHMT2-232ENST00000557487 LACTBP83111 547 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-232ENST00000557487 FMO1Q01740 532 aa17.4■□□□□ 0.38
SHMT2-232ENST00000557487 ENPEPQ07075 957 aa17.4■□□□□ 0.38
SHMT2-232ENST00000557487 STAT4Q14765 748 aa17.4■□□□□ 0.38
SHMT2-232ENST00000557487 LONRF1Q17RB8 773 aa17.4■□□□□ 0.38
SHMT2-232ENST00000557487 ACAD10Q6JQN1 1059 aa17.4■□□□□ 0.38
SHMT2-232ENST00000557487 DAW1Q8N136 415 aa17.4■□□□□ 0.38
SHMT2-232ENST00000557487 UHMK1Q8TAS1 419 aaKnown RBP17.4■□□□□ 0.38
SHMT2-232ENST00000557487 TRIM11Q96F44 468 aa17.4■□□□□ 0.38
SHMT2-232ENST00000557487 RAB3IPQ96QF0 476 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-232ENST00000557487 UNC45AQ9H3U1 944 aa17.4■□□□□ 0.38
SHMT2-232ENST00000557487 AVENQ9NQS1 362 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-232ENST00000557487 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.4■□□□□ 0.38
SHMT2-232ENST00000557487 MRPL11Q9Y3B7 192 aaKnown RBP17.4■□□□□ 0.38
SHMT2-232ENST00000557487 COL2A1P02458 1487 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-232ENST00000557487 TCRBV7S2A1N4TA0A589 114 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 DDTLA6NHG4 134 aaPredicted RBP17.39■□□□□ 0.37
SHMT2-232ENST00000557487 G3V3G9 751 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 ANP32DO95626 131 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 MYBL1P10243 752 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 CCNB1P14635 433 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 GCLMP48507 274 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 STAT2P52630 851 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 DLG4P78352 724 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 PTP4A2Q12974 167 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 RBM26Q5T8P6 1007 aaKnown RBP17.39■□□□□ 0.37
SHMT2-232ENST00000557487 DCAF8Q5TAQ9 597 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 PADI6Q6TGC4 694 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 ASRGL1Q7L266 308 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 PODNQ7Z5L7 613 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 RDH13Q8NBN7 331 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 TBC1D31Q96DN5 1066 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 HSPBP1Q9NZL4 362 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 COQ4Q9Y3A0 265 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 ATRNL1Q5VV63 1379 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 IGF2BP3O00425 579 aaKnown RBP eCLIP17.39■□□□□ 0.37
SHMT2-232ENST00000557487 TP73O15350 636 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 ABHD2P08910 425 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 PLS3P13797 630 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 BRAFP15056 766 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 ATF2P15336 505 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 STX2P32856 288 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 ALDH5A1P51649 535 aaPredicted RBP17.39■□□□□ 0.37
SHMT2-232ENST00000557487 CCNG1P51959 295 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 ATP11AP98196 1134 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 CCDC38Q502W7 563 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 C1orf220Q5T0J3 134 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 ZNF746Q6NUN9 644 aaPredicted RBP17.39■□□□□ 0.37
SHMT2-232ENST00000557487 ENOSF1Q7L5Y1 443 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 USP37Q86T82 979 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 ANKRD35Q8N283 1001 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 ATL2Q8NHH9 583 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 FBF1Q8TES7 1133 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 NSMCE1Q8WV22 266 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 STAMBPL1Q96FJ0 436 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 TMEM117Q9H0C3 514 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 UBN1Q9NPG3 1134 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 FAM198AQ9UFP1 575 aa17.39■□□□□ 0.37
SHMT2-232ENST00000557487 ZBTB39O15060 712 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 THAP12O43422 761 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 ACSL3O95573 720 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 CYP11B1P15538 503 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 IVDP26440 423 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 GTF2H1P32780 548 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 KCNJ1P48048 391 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 GPC3P51654 580 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 SLC18A1P54219 525 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 GTF2BQ00403 316 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 MYO1EQ12965 1108 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 TNIP1Q15025 636 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 MTFR1Q15390 333 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 KCTD19Q17RG1 926 aaPredicted RBP17.38■□□□□ 0.37
SHMT2-232ENST00000557487 LARGE2Q8N3Y3 721 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 AGAP11Q8TF27 550 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 DDX23Q9BUQ8 820 aaKnown RBP17.38■□□□□ 0.37
SHMT2-232ENST00000557487 KCNK9Q9NPC2 374 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 TXLNGQ9NUQ3 528 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 EXOC7Q9UPT5 735 aa17.38■□□□□ 0.37
SHMT2-232ENST00000557487 LIN7AO14910 233 aaPredicted RBP17.37■□□□□ 0.37
SHMT2-232ENST00000557487 CLDN3O15551 220 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 CYP26A1O43174 497 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 LYPLA2O95372 231 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 CFBP00751 764 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 P4HBP07237 508 aaKnown RBP17.37■□□□□ 0.37
SHMT2-232ENST00000557487 MSH2P43246 934 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 KCNJ2P63252 427 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms