RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 NDUFV1P49821 464 aa11.74□□□□□ -0.53
IFT43-212ENST00000556742 LIG4P49917 911 aa11.74□□□□□ -0.53
IFT43-212ENST00000556742 AMPD3Q01432 767 aa11.74□□□□□ -0.53
IFT43-212ENST00000556742 ALCAMQ13740 583 aa11.74□□□□□ -0.53
IFT43-212ENST00000556742 HSP90AA2PQ14568 343 aaPredicted RBP11.74□□□□□ -0.53
IFT43-212ENST00000556742 CNNM4Q6P4Q7 775 aa11.74□□□□□ -0.53
IFT43-212ENST00000556742 ZNF720Q7Z2F6 126 aa11.74□□□□□ -0.53
IFT43-212ENST00000556742 RBM23Q86U06 439 aaKnown RBP11.74□□□□□ -0.53
IFT43-212ENST00000556742 BICD1Q96G01 975 aa11.74□□□□□ -0.53
IFT43-212ENST00000556742 ZBTB45Q96K62 511 aaPredicted RBP11.74□□□□□ -0.53
IFT43-212ENST00000556742 MSLNLQ96KJ4 702 aa11.74□□□□□ -0.53
IFT43-212ENST00000556742 SNX27Q96L92 541 aa11.74□□□□□ -0.53
IFT43-212ENST00000556742 SPATA32Q96LK8 384 aa11.74□□□□□ -0.53
IFT43-212ENST00000556742 UROC1Q96N76 676 aa11.74□□□□□ -0.53
IFT43-212ENST00000556742 ACAP3Q96P50 834 aa11.74□□□□□ -0.53
IFT43-212ENST00000556742 HERC2P3Q9BVR0 1158 aa11.74□□□□□ -0.53
IFT43-212ENST00000556742 STRA6Q9BX79 667 aa11.74□□□□□ -0.53
IFT43-212ENST00000556742 SCAND2PQ9GZW5 306 aaPredicted RBP11.74□□□□□ -0.53
IFT43-212ENST00000556742 ANKFY1Q9P2R3 1169 aa11.74□□□□□ -0.53
IFT43-212ENST00000556742 ADAM28Q9UKQ2 775 aa11.74□□□□□ -0.53
IFT43-212ENST00000556742 SSX2IPQ9Y2D8 614 aa11.74□□□□□ -0.53
IFT43-212ENST00000556742 PRG3Q9Y2Y8 225 aaPredicted RBP11.74□□□□□ -0.53
IFT43-212ENST00000556742 A0A0B4J269 797 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 SMIM28A0A1B0GU29 152 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.73□□□□□ -0.53
IFT43-212ENST00000556742 GRXCR2A6NFK2 248 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 H3BQ06 376 aaPredicted RBP11.73□□□□□ -0.53
IFT43-212ENST00000556742 TMEM189-UBE2V1I3L0A0 370 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 DLL1O00548 723 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 PER2O15055 1255 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 POLR2DO15514 142 aaKnown RBP11.73□□□□□ -0.53
IFT43-212ENST00000556742 LILRB3O75022 631 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 SF3B1O75533 1304 aaKnown RBP eCLIP11.73□□□□□ -0.53
IFT43-212ENST00000556742 KCNE1P15382 129 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 NMT1P30419 496 aaKnown RBP11.73□□□□□ -0.53
IFT43-212ENST00000556742 NUCB2P80303 420 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 DLX2Q07687 328 aaPredicted RBP11.73□□□□□ -0.53
IFT43-212ENST00000556742 COASYQ13057 564 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 PTPN14Q15678 1187 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 ADALQ6DHV7 355 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 PTCRAQ6ISU1 281 aaPredicted RBP11.73□□□□□ -0.53
IFT43-212ENST00000556742 EP400NLQ6ZTU2 488 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 ZBTB33Q86T24 672 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 SFR1Q86XK3 245 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 CCDC65Q8IXS2 484 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 ADAMTS19Q8TE59 1207 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 LEO1Q8WVC0 666 aaPredicted RBP11.73□□□□□ -0.53
IFT43-212ENST00000556742 DHX58Q96C10 678 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 TRIM9Q9C026 710 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 CXCL16Q9H2A7 254 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 MRPL44Q9H9J2 332 aaKnown RBP11.73□□□□□ -0.53
IFT43-212ENST00000556742 PLEKHA5Q9HAU0 1116 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 MRPL17Q9NRX2 175 aaKnown RBP11.73□□□□□ -0.53
IFT43-212ENST00000556742 CHST7Q9NS84 486 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 SLC38A7Q9NVC3 462 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 CLEC1BQ9P126 229 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 CNTN3Q9P232 1028 aa11.73□□□□□ -0.53
IFT43-212ENST00000556742 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.73□□□□□ -0.53
IFT43-212ENST00000556742 OGTO15294 1046 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 FAM189A1O60320 539 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 C1RP00736 705 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 URODP06132 367 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 CLTAP09496 248 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 IDEP14735 1019 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 HOXB8P17481 243 aaPredicted RBP11.72□□□□□ -0.53
IFT43-212ENST00000556742 CMA1P23946 247 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 MATR3P43243 847 aaKnown RBP eCLIP11.72□□□□□ -0.53
IFT43-212ENST00000556742 GLUD2P49448 558 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 OSTNP61366 133 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 DSG1Q02413 1049 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 SMAD4Q13485 552 aaKnown RBP11.72□□□□□ -0.53
IFT43-212ENST00000556742 USP41Q3LFD5 358 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 ZC2HC1CQ53FD0 456 aaPredicted RBP11.72□□□□□ -0.53
IFT43-212ENST00000556742 HERC4Q5GLZ8 1057 aaPredicted RBP11.72□□□□□ -0.53
IFT43-212ENST00000556742 SLFN12LQ6IEE8 588 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 FUT10Q6P4F1 479 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 PPFIBP1Q86W92 1011 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 SMRP1Q8NCR6 262 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 CASP10Q92851 521 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 TSPAN18Q96SJ8 248 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 UHRF1Q96T88 793 aaPredicted RBP11.72□□□□□ -0.53
IFT43-212ENST00000556742 C7orf25Q9BPX7 421 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 EMILIN2Q9BXX0 1053 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 HAPLN2Q9GZV7 340 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 PANK4Q9NVE7 773 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 CD207Q9UJ71 328 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 KCNH3Q9ULD8 1083 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 PCDHB13Q9Y5F0 798 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 HCFC2Q9Y5Z7 792 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 STYXL1Q9Y6J8 313 aa11.72□□□□□ -0.53
IFT43-212ENST00000556742 SCN1AP35498 2009 aa11.71□□□□□ -0.53
IFT43-212ENST00000556742 FAM237AA0A1B0GTK4 181 aa11.71□□□□□ -0.53
IFT43-212ENST00000556742 TTC26A0AVF1 554 aa11.71□□□□□ -0.53
IFT43-212ENST00000556742 CASTOR2A6NHX0 329 aa11.71□□□□□ -0.53
IFT43-212ENST00000556742 F8W810 466 aa11.71□□□□□ -0.53
IFT43-212ENST00000556742 MBTPS2O43462 519 aa11.71□□□□□ -0.53
IFT43-212ENST00000556742 CLASP2O75122 1294 aaKnown RBP11.71□□□□□ -0.53
IFT43-212ENST00000556742 TADA2AO75478 443 aa11.71□□□□□ -0.53
IFT43-212ENST00000556742 KIF4AO95239 1232 aa11.71□□□□□ -0.53
IFT43-212ENST00000556742 GCNT3O95395 438 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms