RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 LRRN4CLQ8ND94 238 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 TRIB2Q92519 343 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 SHC3Q92529 594 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 NLRP4Q96MN2 994 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 KREMEN1Q96MU8 473 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 CGRRF1Q99675 332 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 PDE11AQ9HCR9 933 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 CAPN6Q9Y6Q1 641 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 CNTNAP2Q9UHC6 1331 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 TTLL13PA6NNM8 815 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 ADCY6O43306 1168 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 ZNF865P0CJ78 1059 aaPredicted RBP15.88■□□□□ 0.13
VPS33B-205ENST00000556096 PRLRP16471 622 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 TNNI1P19237 187 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 PHKA2P46019 1235 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 AP3M2P53677 418 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 TUBB4BP68371 445 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 GCNT1Q02742 428 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 MBTD1Q05BQ5 628 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 MTHFD1LQ6UB35 978 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 SRGAP1Q7Z6B7 1085 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 BRSK2Q8IWQ3 736 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 ZNF710Q8N1W2 664 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 PPM1KQ8N3J5 372 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 LNX1Q8TBB1 728 aaPredicted RBP15.88■□□□□ 0.13
VPS33B-205ENST00000556096 PTPRHQ9HD43 1115 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 PRMT7Q9NVM4 692 aaPredicted RBP15.88■□□□□ 0.13
VPS33B-205ENST00000556096 SAR1BQ9Y6B6 198 aa15.88■□□□□ 0.13
VPS33B-205ENST00000556096 RRN3P2A6NIE6 340 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 INO80B-WBP1J3KQ70 363 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 ENC1O14682 589 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 GNRH1P01148 92 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 GJB1P08034 283 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 H2AFZP0C0S5 128 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 TNFAIP3P21580 790 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 WNT7BP56706 349 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 PPFIA1Q13136 1202 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 SURF1Q15526 300 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 ZBTB41Q5SVQ8 909 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 MPZL3Q6UWV2 235 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 H2AFVQ71UI9 128 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 UBXN4Q92575 508 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 AGPAT1Q99943 283 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 TCHPQ9BT92 498 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 PACSIN1Q9BY11 444 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 INO80BQ9C086 356 aaPredicted RBP15.87■□□□□ 0.13
VPS33B-205ENST00000556096 MCOLN1Q9GZU1 580 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 IFT122Q9HBG6 1241 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 TNFSF13BQ9Y275 285 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 Q9Y3F1 56 aa15.87■□□□□ 0.13
VPS33B-205ENST00000556096 A0A0A6YYK5 440 aaPredicted RBP15.86■□□□□ 0.13
VPS33B-205ENST00000556096 DYNC1LI2O43237 492 aaPredicted RBP15.86■□□□□ 0.13
VPS33B-205ENST00000556096 GRIK4Q16099 956 aa15.86■□□□□ 0.13
VPS33B-205ENST00000556096 ERCC6LQ2NKX8 1250 aa15.86■□□□□ 0.13
VPS33B-205ENST00000556096 ATF7IP2Q5U623 682 aa15.86■□□□□ 0.13
VPS33B-205ENST00000556096 TDRD10Q5VZ19 366 aaKnown RBP15.86■□□□□ 0.13
VPS33B-205ENST00000556096 RSRC2Q7L4I2 434 aaKnown RBP15.86■□□□□ 0.13
VPS33B-205ENST00000556096 GLYCTKQ8IVS8 523 aa15.86■□□□□ 0.13
VPS33B-205ENST00000556096 U2AF1L4Q8WU68 220 aaKnown RBP15.86■□□□□ 0.13
VPS33B-205ENST00000556096 KAT5Q92993 513 aa15.86■□□□□ 0.13
VPS33B-205ENST00000556096 ZBTB10Q96DT7 871 aa15.86■□□□□ 0.13
VPS33B-205ENST00000556096 CPSF3Q9UKF6 684 aaKnown RBP15.86■□□□□ 0.13
VPS33B-205ENST00000556096 PCDHGC5Q9Y5F6 944 aa15.86■□□□□ 0.13
VPS33B-205ENST00000556096 TULP1O00294 542 aaPredicted RBP15.85■□□□□ 0.13
VPS33B-205ENST00000556096 HLA-DRAP01903 254 aa15.85■□□□□ 0.13
VPS33B-205ENST00000556096 IFI16Q16666 785 aaKnown RBP15.85■□□□□ 0.13
VPS33B-205ENST00000556096 WDR44Q5JSH3 913 aa15.85■□□□□ 0.13
VPS33B-205ENST00000556096 MARCH8Q5T0T0 291 aa15.85■□□□□ 0.13
VPS33B-205ENST00000556096 ZBTB33Q86T24 672 aa15.85■□□□□ 0.13
VPS33B-205ENST00000556096 WDR49Q8IV35 697 aa15.85■□□□□ 0.13
VPS33B-205ENST00000556096 TATDN2Q93075 761 aa15.85■□□□□ 0.13
VPS33B-205ENST00000556096 C1orf112Q9NSG2 853 aa15.85■□□□□ 0.13
VPS33B-205ENST00000556096 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.85■□□□□ 0.13
VPS33B-205ENST00000556096 V9GYY5 206 aaPredicted RBP15.85■□□□□ 0.13
VPS33B-205ENST00000556096 BUB1O43683 1085 aa15.85■□□□□ 0.13
VPS33B-205ENST00000556096 VNN1O95497 513 aa15.85■□□□□ 0.13
VPS33B-205ENST00000556096 HARSP12081 509 aaKnown RBP15.85■□□□□ 0.13
VPS33B-205ENST00000556096 NAP1L1P55209 391 aaKnown RBP15.85■□□□□ 0.13
VPS33B-205ENST00000556096 POU5F1Q01860 360 aaKnown RBP15.85■□□□□ 0.13
VPS33B-205ENST00000556096 ELF2Q15723 593 aa15.85■□□□□ 0.13
VPS33B-205ENST00000556096 GOLGA1Q92805 767 aa15.85■□□□□ 0.13
VPS33B-205ENST00000556096 MINDY3Q9H8M7 445 aa15.85■□□□□ 0.13
VPS33B-205ENST00000556096 HDAC6Q9UBN7 1215 aa15.85■□□□□ 0.13
VPS33B-205ENST00000556096 SNX12Q9UMY4 172 aa15.85■□□□□ 0.13
VPS33B-205ENST00000556096 AKT3Q9Y243 479 aa15.85■□□□□ 0.13
VPS33B-205ENST00000556096 PTPRJQ12913 1337 aa15.85■□□□□ 0.13
VPS33B-205ENST00000556096 EVPLQ92817 2033 aa15.84■□□□□ 0.13
VPS33B-205ENST00000556096 A0A087WZ62 844 aa15.84■□□□□ 0.13
VPS33B-205ENST00000556096 ZEB2O60315 1214 aa15.84■□□□□ 0.13
VPS33B-205ENST00000556096 F2P00734 622 aa15.84■□□□□ 0.13
VPS33B-205ENST00000556096 TMEM253P0C7T8 217 aa15.84■□□□□ 0.13
VPS33B-205ENST00000556096 GRK4P32298 578 aa15.84■□□□□ 0.13
VPS33B-205ENST00000556096 TNFSF9P41273 254 aa15.84■□□□□ 0.13
VPS33B-205ENST00000556096 PIK3CAP42336 1068 aa15.84■□□□□ 0.13
VPS33B-205ENST00000556096 CHMP4BP1P59074 171 aa15.84■□□□□ 0.13
VPS33B-205ENST00000556096 BIRC3Q13489 604 aa15.84■□□□□ 0.13
VPS33B-205ENST00000556096 LMBRD2Q68DH5 695 aaPredicted RBP15.84■□□□□ 0.13
VPS33B-205ENST00000556096 FBXO46Q6PJ61 603 aaPredicted RBP15.84■□□□□ 0.13
VPS33B-205ENST00000556096 TLK2Q86UE8 772 aa15.84■□□□□ 0.13
VPS33B-205ENST00000556096 MAP7D2Q96T17 732 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms