RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 KRT16P08779 473 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 GRIN1Q05586 938 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 FUKQ8N0W3 1084 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 MCPH1Q8NEM0 835 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 DCAF4Q8WV16 495 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 PCDHA6Q9UN73 950 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 PCDHA8Q9Y5H6 950 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 HNRNPRO43390 633 aaKnown RBP18.47■□□□□ 0.55
SYNE3-204ENST00000555759 RAP1GDS1P52306 607 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 COPAP53621 1224 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 ITGA8P53708 1063 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 MRPL28Q13084 256 aaKnown RBP18.47■□□□□ 0.55
SYNE3-204ENST00000555759 R3HDM1Q15032 1099 aaKnown RBP18.47■□□□□ 0.55
SYNE3-204ENST00000555759 TBC1D10BQ4KMP7 808 aaPredicted RBP18.47■□□□□ 0.55
SYNE3-204ENST00000555759 IRGCQ6NXR0 463 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 PADI6Q6TGC4 694 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 SKA2Q8WVK7 121 aaPredicted RBP18.47■□□□□ 0.55
SYNE3-204ENST00000555759 INO80B-WBP1J3KQ70 363 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 M0R3G1 203 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 CTDNEP1O95476 244 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 TNFAIP1Q13829 316 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 PASD1Q8IV76 773 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 CASP10Q92851 521 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 PRPF18Q99633 342 aaKnown RBP18.47■□□□□ 0.55
SYNE3-204ENST00000555759 INO80BQ9C086 356 aaPredicted RBP18.47■□□□□ 0.55
SYNE3-204ENST00000555759 LRRC7Q96NW7 1537 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 SNRPAP09012 282 aaKnown RBP18.47■□□□□ 0.55
SYNE3-204ENST00000555759 PMS1P54277 932 aaKnown RBP18.47■□□□□ 0.55
SYNE3-204ENST00000555759 PTK7Q13308 1070 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 GPR141Q7Z602 305 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 CATSPER3Q86XQ3 398 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 E2F7Q96AV8 911 aa18.47■□□□□ 0.55
SYNE3-204ENST00000555759 EMSYQ7Z589 1322 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 CDH2P19022 906 aaPredicted RBP18.46■□□□□ 0.55
SYNE3-204ENST00000555759 ERFP50548 548 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 CRELD2Q6UXH1 353 aaPredicted RBP18.46■□□□□ 0.55
SYNE3-204ENST00000555759 ARMCX2Q7L311 632 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 SIX6OS1Q8N1H7 587 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 ZNF446Q9NWS9 450 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 DMGDHQ9UI17 866 aaKnown RBP18.46■□□□□ 0.55
SYNE3-204ENST00000555759 ATP9AO75110 1047 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 STK4Q13043 487 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 GALNT4Q8N4A0 578 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 JADE3Q92613 823 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 SEC31BQ9NQW1 1179 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 HPSEQ9Y251 543 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 GSG1L2A8MUP6 293 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 XPO1O14980 1071 aaKnown RBP18.46■□□□□ 0.55
SYNE3-204ENST00000555759 ENO3P13929 434 aaPredicted RBP18.46■□□□□ 0.55
SYNE3-204ENST00000555759 ATP6V1B1P15313 513 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 ZNF18P17022 549 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 TRIM60Q495X7 471 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 LBHD1Q9BQE6 289 aaPredicted RBP18.46■□□□□ 0.55
SYNE3-204ENST00000555759 CDY2AQ9Y6F7 541 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 CDY1Q9Y6F8 540 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 CLPTM1O96005 669 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 ZCCHC18P0CG32 403 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 PPARGP37231 505 aaPredicted RBP18.46■□□□□ 0.55
SYNE3-204ENST00000555759 TPCN2Q8NHX9 752 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 SH3GL2Q99962 352 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 PLA2R1Q13018 1463 aa18.46■□□□□ 0.55
SYNE3-204ENST00000555759 TBC1D4O60343 1298 aa18.46■□□□□ 0.54
SYNE3-204ENST00000555759 CCND2P30279 289 aa18.46■□□□□ 0.54
SYNE3-204ENST00000555759 BTKQ06187 659 aa18.46■□□□□ 0.54
SYNE3-204ENST00000555759 KRR1Q13601 381 aaKnown RBP18.46■□□□□ 0.54
SYNE3-204ENST00000555759 SCUBE1Q8IWY4 988 aa18.46■□□□□ 0.54
SYNE3-204ENST00000555759 PRPF38AQ8NAV1 312 aaKnown RBP18.46■□□□□ 0.54
SYNE3-204ENST00000555759 ADGRA3Q8IWK6 1321 aa18.45■□□□□ 0.54
SYNE3-204ENST00000555759 ANGPT2O15123 496 aa18.45■□□□□ 0.54
SYNE3-204ENST00000555759 NPEPPSP55786 919 aa18.45■□□□□ 0.54
SYNE3-204ENST00000555759 GEMIN4P57678 1058 aaKnown RBP18.45■□□□□ 0.54
SYNE3-204ENST00000555759 SCARA5Q6ZMJ2 495 aa18.45■□□□□ 0.54
SYNE3-204ENST00000555759 PCYOX1LQ8NBM8 494 aa18.45■□□□□ 0.54
SYNE3-204ENST00000555759 IGDCC4Q8TDY8 1250 aa18.45■□□□□ 0.54
SYNE3-204ENST00000555759 SIKE1Q9BRV8 207 aa18.45■□□□□ 0.54
SYNE3-204ENST00000555759 RPF1Q9H9Y2 349 aaKnown RBP18.45■□□□□ 0.54
SYNE3-204ENST00000555759 ALG6Q9Y672 507 aa18.45■□□□□ 0.54
SYNE3-204ENST00000555759 NPR1P16066 1061 aa18.45■□□□□ 0.54
SYNE3-204ENST00000555759 EIF3EP60228 445 aaKnown RBP18.45■□□□□ 0.54
SYNE3-204ENST00000555759 FAM160B2Q86V87 743 aa18.45■□□□□ 0.54
SYNE3-204ENST00000555759 KIAA0825Q8IV33 1275 aa18.45■□□□□ 0.54
SYNE3-204ENST00000555759 AENQ8WTP8 325 aaKnown RBP18.45■□□□□ 0.54
SYNE3-204ENST00000555759 ATXN2LQ8WWM7 1075 aaKnown RBP18.45■□□□□ 0.54
SYNE3-204ENST00000555759 MAGEB5Q9BZ81 275 aa18.45■□□□□ 0.54
SYNE3-204ENST00000555759 SLC12A6Q9UHW9 1150 aa18.45■□□□□ 0.54
SYNE3-204ENST00000555759 CNOT7Q9UIV1 285 aaKnown RBP18.45■□□□□ 0.54
SYNE3-204ENST00000555759 FAM200BP0CF97 657 aa18.45■□□□□ 0.54
SYNE3-204ENST00000555759 TRMT5Q32P41 509 aaKnown RBP18.45■□□□□ 0.54
SYNE3-204ENST00000555759 TTC39BQ5VTQ0 682 aaPredicted RBP18.45■□□□□ 0.54
SYNE3-204ENST00000555759 ITPRIPL1Q6GPH6 555 aa18.45■□□□□ 0.54
SYNE3-204ENST00000555759 EXT2Q93063 718 aa18.45■□□□□ 0.54
SYNE3-204ENST00000555759 HEY2Q9UBP5 337 aa18.45■□□□□ 0.54
SYNE3-204ENST00000555759 ZNF483Q8TF39 744 aaPredicted RBP18.45■□□□□ 0.54
SYNE3-204ENST00000555759 GTPBP10A4D1E9 387 aaKnown RBP18.44■□□□□ 0.54
SYNE3-204ENST00000555759 AHCYL1O43865 530 aa18.44■□□□□ 0.54
SYNE3-204ENST00000555759 CAND2O75155 1236 aa18.44■□□□□ 0.54
SYNE3-204ENST00000555759 SDC4P31431 198 aa18.44■□□□□ 0.54
SYNE3-204ENST00000555759 FOXR1Q6PIV2 292 aa18.44■□□□□ 0.54
SYNE3-204ENST00000555759 C7orf31Q8N865 590 aa18.44■□□□□ 0.54
SYNE3-204ENST00000555759 PPP2R3CQ969Q6 453 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms