RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 YDJCA8MPS7 323 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 SLC16A4O15374 487 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 PPIP5K2O43314 1243 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 TCEA3O75764 348 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 BPIFB4P59827 614 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 MAP2K1Q02750 393 aaPredicted RBP17.31■□□□□ 0.36
TUBB3-209ENST00000555609 PPP1R7Q15435 360 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 NBPF9Q3BBW0 867 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 OGFOD1Q8N543 542 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 BBOF1Q8ND07 529 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 TMEM161BQ8NDZ6 487 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 MDM1Q8TC05 714 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 DDX1Q92499 740 aaKnown RBP17.31■□□□□ 0.36
TUBB3-209ENST00000555609 KAT5Q92993 513 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 GMLQ99445 158 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 SENP7Q9BQF6 1050 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 SAMD15Q9P1V8 674 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.31■□□□□ 0.36
TUBB3-209ENST00000555609 PSME4Q14997 1843 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 TISP43B9A030 160 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 H0YCG3 227 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 FDX1P10109 184 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 SCP2P22307 547 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 RTP1P59025 263 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 DMP1Q13316 513 aaPredicted RBP17.31■□□□□ 0.36
TUBB3-209ENST00000555609 AUHQ13825 339 aaKnown RBP17.31■□□□□ 0.36
TUBB3-209ENST00000555609 OTUD6AQ7L8S5 288 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 SEMA4DQ92854 862 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 SGSM3Q96HU1 749 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 AGBL1Q96MI9 1066 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 COL20A1Q9P218 1284 aa17.31■□□□□ 0.36
TUBB3-209ENST00000555609 DNM1LO00429 736 aa17.3■□□□□ 0.36
TUBB3-209ENST00000555609 BACH1O14867 736 aa17.3■□□□□ 0.36
TUBB3-209ENST00000555609 GARTP22102 1010 aa17.3■□□□□ 0.36
TUBB3-209ENST00000555609 CNGA1P29973 690 aa17.3■□□□□ 0.36
TUBB3-209ENST00000555609 ADSSP30520 456 aa17.3■□□□□ 0.36
TUBB3-209ENST00000555609 MRPS9P82933 396 aaKnown RBP17.3■□□□□ 0.36
TUBB3-209ENST00000555609 CENPCQ03188 943 aa17.3■□□□□ 0.36
TUBB3-209ENST00000555609 PTK6Q13882 451 aa17.3■□□□□ 0.36
TUBB3-209ENST00000555609 SGO2Q562F6 1265 aa17.3■□□□□ 0.36
TUBB3-209ENST00000555609 RHBDF2Q6PJF5 856 aa17.3■□□□□ 0.36
TUBB3-209ENST00000555609 SYTL5Q8TDW5 730 aaPredicted RBP17.3■□□□□ 0.36
TUBB3-209ENST00000555609 PLCD4Q9BRC7 762 aa17.3■□□□□ 0.36
TUBB3-209ENST00000555609 FOXP3Q9BZS1 431 aa17.3■□□□□ 0.36
TUBB3-209ENST00000555609 KIAA1586Q9HCI6 787 aa17.3■□□□□ 0.36
TUBB3-209ENST00000555609 LRRC4CQ9HCJ2 640 aa17.3■□□□□ 0.36
TUBB3-209ENST00000555609 FBXO28Q9NVF7 368 aa17.3■□□□□ 0.36
TUBB3-209ENST00000555609 MAFGO15525 162 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 GRIN3BO60391 1043 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 MAPK4P31152 587 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 IFI35P80217 286 aaPredicted RBP17.29■□□□□ 0.36
TUBB3-209ENST00000555609 CYP24A1Q07973 514 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 XKR9Q5GH70 373 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 FAM102BQ5T8I3 360 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 CBWD2Q8IUF1 395 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 FUKQ8N0W3 1084 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 SNF8Q96H20 258 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 MTFR1LQ9H019 292 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 CLRN2A0PK11 232 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 GAS8O95995 478 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 RDXP35241 583 aaKnown RBP17.29■□□□□ 0.36
TUBB3-209ENST00000555609 NPTX2P47972 431 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 CNGA2Q16280 664 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 SMYD5Q6GMV2 418 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 PARP9Q8IXQ6 854 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 IL31RAQ8NI17 732 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 KCNN1Q92952 543 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 VPS33BQ9H267 617 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 KMT5AQ9NQR1 393 aa17.29■□□□□ 0.36
TUBB3-209ENST00000555609 UTRNP46939 3433 aa17.28■□□□□ 0.36
TUBB3-209ENST00000555609 CFAP73A6NFT4 308 aa17.28■□□□□ 0.36
TUBB3-209ENST00000555609 ANKRD63C9JTQ0 380 aa17.28■□□□□ 0.36
TUBB3-209ENST00000555609 NFIBO00712 420 aa17.28■□□□□ 0.36
TUBB3-209ENST00000555609 UNGP13051 313 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-209ENST00000555609 SNCBQ16143 134 aa17.28■□□□□ 0.36
TUBB3-209ENST00000555609 BRDTQ58F21 947 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-209ENST00000555609 CYB5D1Q6P9G0 228 aa17.28■□□□□ 0.36
TUBB3-209ENST00000555609 TRIM72Q6ZMU5 477 aa17.28■□□□□ 0.36
TUBB3-209ENST00000555609 RELL1Q8IUW5 271 aa17.28■□□□□ 0.36
TUBB3-209ENST00000555609 GPD1LQ8N335 351 aa17.28■□□□□ 0.36
TUBB3-209ENST00000555609 ATL2Q8NHH9 583 aa17.28■□□□□ 0.36
TUBB3-209ENST00000555609 SLC38A10Q9HBR0 1119 aa17.28■□□□□ 0.36
TUBB3-209ENST00000555609 TCRBV7S2A1N4TA0A589 114 aa17.27■□□□□ 0.36
TUBB3-209ENST00000555609 GOLGA8IPA6NC78 632 aa17.27■□□□□ 0.36
TUBB3-209ENST00000555609 GOLGA8JA6NMD2 632 aa17.27■□□□□ 0.36
TUBB3-209ENST00000555609 SORBS3O60504 671 aa17.27■□□□□ 0.36
TUBB3-209ENST00000555609 FGFR4P22455 802 aa17.27■□□□□ 0.36
TUBB3-209ENST00000555609 GSCP56915 257 aaPredicted RBP17.27■□□□□ 0.36
TUBB3-209ENST00000555609 KRT17Q04695 432 aa17.27■□□□□ 0.36
TUBB3-209ENST00000555609 PGM5Q15124 567 aa17.27■□□□□ 0.36
TUBB3-209ENST00000555609 ZYXQ15942 572 aaKnown RBP17.27■□□□□ 0.36
TUBB3-209ENST00000555609 LRRC34Q8IZ02 419 aa17.27■□□□□ 0.36
TUBB3-209ENST00000555609 MCOLN2Q8IZK6 566 aa17.27■□□□□ 0.36
TUBB3-209ENST00000555609 VCPIP1Q96JH7 1222 aa17.27■□□□□ 0.36
TUBB3-209ENST00000555609 TRAIPQ9BWF2 469 aa17.27■□□□□ 0.36
TUBB3-209ENST00000555609 CDC42EP4Q9H3Q1 356 aaKnown RBP17.27■□□□□ 0.36
TUBB3-209ENST00000555609 SPON1Q9HCB6 807 aa17.27■□□□□ 0.36
TUBB3-209ENST00000555609 PKD2L1Q9P0L9 805 aa17.27■□□□□ 0.36
TUBB3-209ENST00000555609 PCDHB2Q9Y5E7 798 aa17.27■□□□□ 0.36
TUBB3-209ENST00000555609 DENND3A2RUS2 1198 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms