RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 CA8P35219 290 aa14.97□□□□□ -0.01
SNX6-203ENST00000555416 ME1P48163 572 aa14.97□□□□□ -0.01
SNX6-203ENST00000555416 CASP5P51878 434 aa14.97□□□□□ -0.01
SNX6-203ENST00000555416 GTF2BQ00403 316 aa14.97□□□□□ -0.01
SNX6-203ENST00000555416 MCL1Q07820 350 aa14.97□□□□□ -0.01
SNX6-203ENST00000555416 KCNA1Q09470 495 aa14.97□□□□□ -0.01
SNX6-203ENST00000555416 TUSC3Q13454 348 aa14.97□□□□□ -0.01
SNX6-203ENST00000555416 NOLC1Q14978 699 aaKnown RBP eCLIP14.97□□□□□ -0.01
SNX6-203ENST00000555416 ATL3Q6DD88 541 aa14.97□□□□□ -0.01
SNX6-203ENST00000555416 CD300LGQ6UXG3 332 aa14.97□□□□□ -0.01
SNX6-203ENST00000555416 FAM178BQ8IXR5 827 aa14.97□□□□□ -0.01
SNX6-203ENST00000555416 KCNG4Q8TDN1 519 aa14.97□□□□□ -0.01
SNX6-203ENST00000555416 LEO1Q8WVC0 666 aaPredicted RBP14.97□□□□□ -0.01
SNX6-203ENST00000555416 SNX27Q96L92 541 aa14.97□□□□□ -0.01
SNX6-203ENST00000555416 HERC2P3Q9BVR0 1158 aa14.97□□□□□ -0.01
SNX6-203ENST00000555416 CCDC94Q9BW85 323 aaPredicted RBP14.97□□□□□ -0.01
SNX6-203ENST00000555416 STRA6Q9BX79 667 aa14.97□□□□□ -0.01
SNX6-203ENST00000555416 CD207Q9UJ71 328 aa14.97□□□□□ -0.01
SNX6-203ENST00000555416 CDH22Q9UJ99 828 aa14.97□□□□□ -0.01
SNX6-203ENST00000555416 IRAK3Q9Y616 596 aa14.97□□□□□ -0.01
SNX6-203ENST00000555416 BDP1A6H8Y1 2624 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 C2CD2LO14523 706 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 MBTPS2O43462 519 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 FAM189A1O60320 539 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 PPP1R37O75864 691 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 PIGRP01833 764 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 SOD2P04179 222 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 CNPP09543 421 aaKnown RBP14.96□□□□□ -0.01
SNX6-203ENST00000555416 CASP1P29466 404 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 TNFSF9P41273 254 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 HSP90AA2PQ14568 343 aaPredicted RBP14.96□□□□□ -0.01
SNX6-203ENST00000555416 SLC10A6Q3KNW5 377 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 RESP18Q5W5W9 173 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 KANK3Q6NY19 840 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 FUT10Q6P4F1 479 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 SYCE2Q6PIF2 218 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 ZNF720Q7Z2F6 126 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 MAP4K3Q8IVH8 894 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 GLIS3Q8NEA6 775 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 SLC22A17Q8WUG5 538 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 HPS3Q969F9 1004 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 C18orf25Q96B23 403 aaPredicted RBP14.96□□□□□ -0.01
SNX6-203ENST00000555416 BICD1Q96G01 975 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 ACAP3Q96P50 834 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 CDCA3Q99618 268 aaPredicted RBP14.96□□□□□ -0.01
SNX6-203ENST00000555416 COLEC11Q9BWP8 271 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 APOL5Q9BWW9 433 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 KBTBD4Q9NVX7 518 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 KCNG1Q9UIX4 513 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 HCFC2Q9Y5Z7 792 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 NCOR1O75376 2440 aa14.96□□□□□ -0.01
SNX6-203ENST00000555416 FRMD3A2A2Y4 597 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 CARNS1A5YM72 827 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 H0YCG3 227 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 HNRNPDLO14979 420 aaKnown RBP14.95□□□□□ -0.02
SNX6-203ENST00000555416 POLR2DO15514 142 aaKnown RBP14.95□□□□□ -0.02
SNX6-203ENST00000555416 CLDN3O15551 220 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 CXCL8P10145 99 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 MYBP10242 640 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 IDEP14735 1019 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 EPCAMP16422 314 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 LIG4P49917 911 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 SPAG1Q07617 926 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 COASYQ13057 564 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 KIAA0319Q5VV43 1072 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 TMEM184AQ6ZMB5 413 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 APBB1IPQ7Z5R6 666 aaPredicted RBP14.95□□□□□ -0.02
SNX6-203ENST00000555416 SMRP1Q8NCR6 262 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 C3orf58Q8NDZ4 430 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 KHSRPQ92945 711 aaKnown RBP eCLIP14.95□□□□□ -0.028e-9■■■□□ 15.5
SNX6-203ENST00000555416 KLHL5Q96PQ7 755 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 S1PR5Q9H228 398 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 ST6GALNAC4Q9H4F1 302 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 CHST7Q9NS84 486 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 ADAM28Q9UKQ2 775 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 CFAP45Q9UL16 551 aa14.95□□□□□ -0.02
SNX6-203ENST00000555416 A0A0B4J269 797 aa14.94□□□□□ -0.02
SNX6-203ENST00000555416 KCNE1P15382 129 aa14.94□□□□□ -0.02
SNX6-203ENST00000555416 MATR3P43243 847 aaKnown RBP eCLIP14.94□□□□□ -0.02
SNX6-203ENST00000555416 CLCNKBP51801 687 aa14.94□□□□□ -0.02
SNX6-203ENST00000555416 YARSP54577 528 aaKnown RBP14.94□□□□□ -0.02
SNX6-203ENST00000555416 DSG1Q02413 1049 aa14.94□□□□□ -0.02
SNX6-203ENST00000555416 SMAD4Q13485 552 aaKnown RBP14.94□□□□□ -0.02
SNX6-203ENST00000555416 ANKRD54Q6NXT1 300 aa14.94□□□□□ -0.02
SNX6-203ENST00000555416 GRAMD1CQ8IYS0 662 aa14.94□□□□□ -0.02
SNX6-203ENST00000555416 ZSWIM2Q8NEG5 633 aa14.94□□□□□ -0.02
SNX6-203ENST00000555416 TRIM9Q9C026 710 aa14.94□□□□□ -0.02
SNX6-203ENST00000555416 MRPL44Q9H9J2 332 aaKnown RBP14.94□□□□□ -0.02
SNX6-203ENST00000555416 PANK4Q9NVE7 773 aa14.94□□□□□ -0.02
SNX6-203ENST00000555416 CNTN3Q9P232 1028 aa14.94□□□□□ -0.02
SNX6-203ENST00000555416 USP15Q9Y4E8 981 aaPredicted RBP14.94□□□□□ -0.02
SNX6-203ENST00000555416 TCHHQ07283 1943 aa14.94□□□□□ -0.02
SNX6-203ENST00000555416 CITO14578 2027 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.93□□□□□ -0.02
SNX6-203ENST00000555416 TTC26A0AVF1 554 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 I3L4J1 428 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 TNFRSF10AO00220 468 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 TEX28O15482 410 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 NR1I2O75469 434 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 TADA2AO75478 443 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms