RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 NCDNQ9UBB6 729 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 TMPRSS11EQ9UL52 423 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 SYNPO2Q9UMS6 1093 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 USP18Q9UMW8 372 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 LUC7L2Q9Y383 392 aaKnown RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 PCDHGA9Q9Y5G4 932 aaKnown RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 PCDHGA8Q9Y5G5 932 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 PCDHGA7Q9Y5G6 932 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 PCDHGA6Q9Y5G7 932 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 PCDHGA3Q9Y5H0 932 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 PCDHGA2Q9Y5H1 932 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 FANCAO15360 1455 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 CAMSAP1Q5T5Y3 1602 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 GRXCR1A8MXD5 290 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 RPS6KA4O75676 772 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 ABLIM3O94929 683 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 AGXTP21549 392 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 ZFP36P26651 326 aaKnown RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 RECQLP46063 649 aaPredicted RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 MTNR1BP49286 362 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 GPR15P49685 360 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 SESN2P58004 480 aaPredicted RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 TRIM25Q14258 630 aaKnown RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 PPP2R5AQ15172 486 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 CSRP2Q16527 193 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 GAGE13Q4V321 117 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 FKBP15Q5T1M5 1219 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 LRCH2Q5VUJ6 765 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 EFCAB2Q5VUJ9 269 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 KCNK18Q7Z418 384 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 MSL3Q8N5Y2 521 aaKnown RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 OR14C36Q8NHC7 312 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 AUTS2Q8WXX7 1259 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 SSH1Q8WYL5 1049 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 LPPQ93052 612 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 HIST1H2AHQ96KK5 128 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 HIST1H2AJQ99878 128 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 TCF25Q9BQ70 676 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 NOL10Q9BSC4 688 aaKnown RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 GPR87Q9BY21 358 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 CPEB1Q9BZB8 566 aaKnown RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 ENKD1Q9H0I2 346 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 ZIM2Q9NZV7 527 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 IP6K2Q9UHH9 426 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 DPP7Q9UHL4 492 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 PRSS50Q9UI38 385 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 ZNF180Q9UJW8 692 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 RCAN3Q9UKA8 241 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 PCDHB6Q9Y5E3 794 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 GPR45Q9Y5Y3 372 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 MAGI3Q5TCQ9 1506 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 ZFYVE16Q7Z3T8 1539 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 TSPAN6O43657 245 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 NRP2O60462 931 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 LY86O95711 162 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 JUNP05412 331 aaKnown RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 CT47B1P0C2W7 299 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 OSMP13725 252 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 ZSCAN20P17040 1043 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 HK1P19367 917 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 FBLP22087 321 aaKnown RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 XPAP23025 273 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 CASRP41180 1078 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 SLC5A3P53794 718 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 CDK17Q00537 523 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 COL10A1Q03692 680 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 PPARAQ07869 468 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 SPIDRQ14159 915 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 ODF1Q14990 250 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 LRRC41Q15345 812 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 MUM1Q2TAK8 710 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 KRTAP15-1Q3LI76 137 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 CCDC178Q5BJE1 867 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 KRT40Q6A162 431 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 SLC41A1Q8IVJ1 513 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 GSPT2Q8IYD1 628 aaKnown RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 CHPFQ8IZ52 775 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 CMTM4Q8IZR5 234 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 CPA6Q8N4T0 437 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 CDYL2Q8N8U2 506 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 NTN5Q8WTR8 489 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 ATXN2LQ8WWM7 1075 aaKnown RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 GAB3Q8WWW8 586 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 JPH3Q8WXH2 748 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 JADE3Q92613 823 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 TEKT5Q96M29 485 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 CAMKK2Q96RR4 588 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 AGAP2Q99490 1192 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 MNTQ99583 582 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 RTFDC1Q9BY42 306 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 CDH19Q9H159 772 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 IFT122Q9HBG6 1241 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 TCF7L1Q9HCS4 588 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 ZNF277Q9NRM2 450 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 PARPBPQ9NWS1 579 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 EVLQ9UI08 416 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 ANKRD6Q9Y2G4 727 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 REXO2Q9Y3B8 237 aaKnown RBP1.99□□□□□ -2.09
PRPF39-208ENST00000554785 CDY2AQ9Y6F7 541 aa1.99□□□□□ -2.09
PRPF39-208ENST00000554785 HECW1Q76N89 1606 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms