RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 UBLCP1Q8WVY7 318 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 RAPGEF5Q92565 580 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 TBC1D5Q92609 795 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 KISS1RQ969F8 398 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 MIEF2Q96C03 454 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 CLUHP3Q96NS8 147 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 INPP4AQ96PE3 977 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 MDFIQ99750 246 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 MMTAG2Q9BU76 263 aaKnown RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 SPATA9Q9BWV2 254 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 FGFBP2Q9BYJ0 223 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 CELF4Q9BZC1 486 aaKnown RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 MTFR1LQ9H019 292 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 TMBIM4Q9HC24 238 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 HOMER2Q9NSB8 354 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 TMOD3Q9NYL9 352 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 TBC1D7Q9P0N9 293 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 SLC12A6Q9UHW9 1150 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ATXN7L1Q9ULK2 861 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 RNF112Q9ULX5 631 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 PCDHB10Q9UN67 800 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 PCDHA4Q9UN74 947 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 TRIM33Q9UPN9 1127 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 PLCH1Q4KWH8 1693 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 NUP98P52948 1817 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 BICDL2A1A5D9 508 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 TSPY2A6NKD2 308 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 SLC22A31A6NKX4 558 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 HMGB1P1B2RPK0 211 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 GCOM1H8Y6P7 765 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 SOX1O00570 391 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 C2CD2LO14523 706 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 PJA2O43164 708 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 DAPK3O43293 454 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 TRAPPC3O43617 180 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 STARD3NLO95772 234 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 MYZAPP0CAP1 466 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 SPATA31C1P0DKV0 1188 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 CALM1P0DP23 149 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 CALM2P0DP24 149 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 CALM3P0DP25 149 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 EPHA1P21709 976 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 KLRK1P26718 216 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 NF2P35240 595 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 COPB2P35606 906 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 HSPA9P38646 679 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 CDR1P51861 262 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 TBX4P57082 545 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 POLR2FP61218 127 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 MAGOHP61326 146 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 CTBSQ01459 385 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 CHRNDQ07001 517 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 PPP2R5BQ15173 497 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 SNCBQ16143 134 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 CDC37Q16543 378 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 KIAA0753Q2KHM9 967 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 SLC10A6Q3KNW5 377 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 GLE1Q53GS7 698 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 FIGNQ5HY92 759 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 PERM1Q5SV97 790 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 WLSQ5T9L3 541 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 CENPPQ6IPU0 288 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 LRFN4Q6PJG9 635 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 EEPD1Q7L9B9 569 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 CD302Q8IX05 232 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 NIM1KQ8IY84 436 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 FAM133AQ8N9E0 248 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 USP38Q8NB14 1042 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 ZSWIM2Q8NEG5 633 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 RUBCNQ92622 972 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 MAGOHBQ96A72 148 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 ATG4CQ96DT6 458 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 ZNF837Q96EG3 531 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 DYNLL2Q96FJ2 89 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 SGSM3Q96HU1 749 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 FAXDC2Q96IV6 333 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 EXOC2Q96KP1 924 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 NACC1Q96RE7 527 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 PYM1Q9BRP8 204 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 MTA3Q9BTC8 594 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 PAGR1Q9BTK6 254 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 TRIM31Q9BZY9 425 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 CCSER1Q9C0I3 900 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 DDX47Q9H0S4 455 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 TAF1DQ9H5J8 278 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 RRAGCQ9HB90 399 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 A1CFQ9NQ94 594 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 IL17RBQ9NRM6 502 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 AMACRQ9UHK6 382 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 FBXL5Q9UKA1 691 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 CACNA1SQ13698 1873 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 TNS2Q63HR2 1409 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 ARAP2Q8WZ64 1704 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 TOGARAM1Q9Y4F4 1720 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 PAPPAQ13219 1627 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 GOLGA6L10A6NI86 522 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 SMIM23A6NLE4 172 aa2.78□□□□□ -1.96
PRPF39-207ENST00000554439 EIF4E1BA6NMX2 242 aaKnown RBP2.78□□□□□ -1.96
PRPF39-207ENST00000554439 F8W031 263 aaPredicted RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms