RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 LUC7L2Q9Y383 392 aaKnown RBP6.22□□□□□ -1.41
MTHFD1-206ENST00000554353 MYPNQ86TC9 1320 aa6.22□□□□□ -1.41
MTHFD1-206ENST00000554353 FAM208AQ9UK61 1670 aaKnown RBP6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 KLHL33A6NCF5 533 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 TCAF2A6NFQ2 919 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 AKAP10O43572 662 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 CYP7B1O75881 506 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 IGHDP01880 384 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 RBP3P10745 1247 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 PI3P19957 117 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 GLDCP23378 1020 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 ANP32AP39687 249 aaKnown RBP6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 LGALS4P56470 323 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 NFATC3Q12968 1075 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 KANK2Q63ZY3 851 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 TRMT10BQ6PF06 316 aaKnown RBP6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 OTOP2Q7RTS6 562 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 FAM129CQ86XR2 697 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 IP6K1Q92551 441 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 LTV1Q96GA3 475 aaPredicted RBP6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 PWWP2AQ96N64 755 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 SLC38A3Q99624 504 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 TMX4Q9H1E5 349 aaPredicted RBP6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 KCTD10Q9H3F6 313 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 PRDM12Q9H4Q4 367 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 KCND1Q9NSA2 647 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 ZIM2Q9NZV7 527 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 IP6K2Q9UHH9 426 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 FBXO9Q9UK97 447 aaPredicted RBP6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 CNOT6Q9ULM6 557 aaKnown RBP6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 RPS6KL1Q9Y6S9 549 aa6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 EDC4Q6P2E9 1401 aaKnown RBP6.21□□□□□ -1.42
MTHFD1-206ENST00000554353 PCNTO95613 3336 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 CCDC189A1A4V9 331 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 TRIM75PA6NK02 468 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 H0Y858 1186 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 FZD9O00144 591 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 CT47B1P0C2W7 299 aaPredicted RBP6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 U2AF1L5P0DN76 240 aaPredicted RBP6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 OSMP13725 252 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 TMPOP42166 694 aaKnown RBP6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 MLLT6P55198 1093 aaPredicted RBP6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 U2AF1Q01081 240 aaKnown RBP eCLIP6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 PPARAQ07869 468 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 PIN1Q13526 163 aaPredicted RBP6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 TRIM25Q14258 630 aaKnown RBP6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 STILQ15468 1287 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 SYCP2LQ5T4T6 812 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 C14orf80Q86SX3 495 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 FNIP1Q8TF40 1166 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 RAX2Q96IS3 184 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 MPHOSPH6Q99547 160 aaKnown RBP6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 NOL10Q9BSC4 688 aaKnown RBP6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 SYT17Q9BSW7 474 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 SLC13A1Q9BZW2 595 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 WNT8AQ9H1J5 351 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 LUC7LQ9NQ29 371 aaKnown RBP6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 FTSJ1Q9UET6 329 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 DPP7Q9UHL4 492 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 DENND2AQ9ULE3 1009 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 TNNQ9UQP3 1299 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 INVSQ9Y283 1065 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 RNF114Q9Y508 228 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 KCTD3Q9Y597 815 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 NUMBLQ9Y6R0 609 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 TUBGCP6Q96RT7 1819 aa6.2□□□□□ -1.42
MTHFD1-206ENST00000554353 LY75O60449 1722 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 QSER1Q2KHR3 1735 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 SHANK3Q9BYB0 1731 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 PAPPAQ13219 1627 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 PCDHGA12O60330 932 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 OPHN1O60890 802 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 CAND2O75155 1236 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 PFKMP08237 780 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 C1QTNF9P0C862 333 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 CALRP27797 417 aaKnown RBP6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 IL13P35225 146 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 RECQLP46063 649 aaPredicted RBP6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 CCT2P78371 535 aaKnown RBP6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 HTRA3P83110 453 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 CDK17Q00537 523 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 MAP3K12Q12852 859 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 ODF1Q14990 250 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 ZRSR2Q15696 482 aaKnown RBP6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 ZNF648Q5T619 568 aaPredicted RBP6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 CXXC5Q7LFL8 322 aaKnown RBP6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 OR5AN1Q8NGI8 311 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 SLC39A13Q96H72 371 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 COG3Q96JB2 828 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 SLC2A13Q96QE2 648 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 PPP1R16BQ96T49 567 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 EPB41L4AQ9HCS5 686 aaPredicted RBP6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 CHST12Q9NRB3 414 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 KCMF1Q9P0J7 381 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 ZNF180Q9UJW8 692 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 CDC42EP3Q9UKI2 254 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 SMG5Q9UPR3 1016 aaKnown RBP6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 PCDHGA9Q9Y5G4 932 aaKnown RBP6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 PCDHGA8Q9Y5G5 932 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 PCDHGA7Q9Y5G6 932 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms