RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 HNRNPDLO14979 420 aaKnown RBP13.86□□□□□ -0.19
SHMT2-205ENST00000553474 CYP26A1O43174 497 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 STBD1O95210 358 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 NUDT17P0C025 328 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 USP8P40818 1118 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 MDH1P40925 334 aaKnown RBP13.86□□□□□ -0.19
SHMT2-205ENST00000553474 FNTAP49354 379 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 CORO7P57737 925 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 ZNF844Q08AG5 666 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 VGLL4Q14135 290 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 XKR3Q5GH77 459 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 ACAD10Q6JQN1 1059 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 MIS18BP1Q6P0N0 1132 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 C15orf39Q6ZRI6 1047 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 HOOK3Q86VS8 718 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 JAMLQ86YT9 394 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 ZNF564Q8TBZ8 553 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-205ENST00000553474 MAIP1Q8WWC4 291 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 CLMNQ96JQ2 1002 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 TXLNGYQ9BZA5 131 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 EPN3Q9H201 632 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 RASSF4Q9H2L5 321 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 ACAD9Q9H845 621 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 AVENQ9NQS1 362 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-205ENST00000553474 ZNF214Q9UL59 606 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-205ENST00000553474 TRPC6Q9Y210 931 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 STYXL1Q9Y6J8 313 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 SIP14410 1827 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 PTPRAP18433 802 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 COMTP21964 271 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 LSP1P33241 339 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 SLC1A1P43005 524 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 DHX9Q08211 1270 aaKnown RBP13.85□□□□□ -0.19
SHMT2-205ENST00000553474 FSTL1Q12841 308 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 PTPROQ16827 1216 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 CST9Q5W186 159 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 KCTD16Q68DU8 428 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 SLFN12LQ6IEE8 588 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 SNRNP48Q6IEG0 339 aaKnown RBP13.85□□□□□ -0.19
SHMT2-205ENST00000553474 SV2AQ7L0J3 742 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 SLC47A2Q86VL8 602 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 DDX42Q86XP3 938 aaKnown RBP eCLIP13.85□□□□□ -0.19
SHMT2-205ENST00000553474 C12orf50Q8NA57 414 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-205ENST00000553474 DNERQ8NFT8 737 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 UBLCP1Q8WVY7 318 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-205ENST00000553474 SEMA4DQ92854 862 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 SLCO2A1Q92959 643 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 PCDHB18PQ96TA0 734 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 NEUROG2Q9H2A3 272 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 PLEKHA4Q9H4M7 779 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 ELP3Q9H9T3 547 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 CYP26B1Q9NR63 512 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 C1orf112Q9NSG2 853 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 ZDHHC18Q9NUE0 388 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 HOXC10Q9NYD6 342 aa13.85□□□□□ -0.19
SHMT2-205ENST00000553474 MTRF1LQ9UGC7 380 aaKnown RBP13.85□□□□□ -0.19
SHMT2-205ENST00000553474 PTPRFP10586 1907 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 GOLGA8IPA6NC78 632 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 GOLGA8JA6NMD2 632 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 SPATA31C2B4DYI2 1134 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 NDUFAB1O14561 156 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 EXTL3O43909 919 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 ZNF862O60290 1169 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 LDHAP00338 332 aaKnown RBP13.84□□□□□ -0.19
SHMT2-205ENST00000553474 PIGRP01833 764 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 ICAM3P32942 547 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 MAN1A1P33908 653 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 MAGEA9P43362 315 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 RWDD2BP57060 319 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 SLC39A4Q6P5W5 647 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 FOXR1Q6PIV2 292 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 ABHD15Q6UXT9 468 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 MICALCLQ6ZW33 695 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 CYFIP1Q7L576 1253 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 ANKRD13AQ8IZ07 590 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 TAS1R2Q8TE23 839 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 ATP8B4Q8TF62 1192 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 DDX1Q92499 740 aaKnown RBP13.84□□□□□ -0.19
SHMT2-205ENST00000553474 CCDC127Q96BQ5 260 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 ZNF653Q96CK0 615 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 SAAL1Q96ER3 474 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 NUP85Q9BW27 656 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 CELF4Q9BZC1 486 aaKnown RBP13.84□□□□□ -0.19
SHMT2-205ENST00000553474 CNOT10Q9H9A5 744 aaKnown RBP13.84□□□□□ -0.19
SHMT2-205ENST00000553474 CYP39A1Q9NYL5 469 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 ABT1Q9ULW3 272 aaKnown RBP13.84□□□□□ -0.19
SHMT2-205ENST00000553474 PCDHB2Q9Y5E7 798 aa13.84□□□□□ -0.19
SHMT2-205ENST00000553474 TMEM150BA6NC51 233 aa13.83□□□□□ -0.19
SHMT2-205ENST00000553474 SPOPO43791 374 aa13.83□□□□□ -0.19
SHMT2-205ENST00000553474 MMEP08473 750 aa13.83□□□□□ -0.19
SHMT2-205ENST00000553474 HUNKP57058 714 aa13.83□□□□□ -0.19
SHMT2-205ENST00000553474 IRX5P78411 483 aaPredicted RBP13.83□□□□□ -0.19
SHMT2-205ENST00000553474 MESDQ14696 234 aa13.83□□□□□ -0.19
SHMT2-205ENST00000553474 SLMAPQ14BN4 828 aa13.83□□□□□ -0.19
SHMT2-205ENST00000553474 PSMD6Q15008 389 aa13.83□□□□□ -0.19
SHMT2-205ENST00000553474 WDR44Q5JSH3 913 aa13.83□□□□□ -0.19
SHMT2-205ENST00000553474 SWSAP1Q6NVH7 229 aa13.83□□□□□ -0.19
SHMT2-205ENST00000553474 TRIM72Q6ZMU5 477 aa13.83□□□□□ -0.19
SHMT2-205ENST00000553474 SH2D3CQ8N5H7 860 aa13.83□□□□□ -0.19
SHMT2-205ENST00000553474 ZSWIM2Q8NEG5 633 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms