RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	NBPF20	Q3BBV1	942 aa		13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	SEZ6	Q53EL9	994 aa		13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	TDRD10	Q5VZ19	366 aa	Known RBP	13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	TAF2	Q6P1X5	1199 aa		13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	CXCL17	Q6UXB2	119 aa		13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	GPIHBP1	Q8IV16	184 aa		13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	SLAIN1	Q8ND83	568 aa		13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	DNAJB3	Q8WWF6	145 aa		13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	CPB2	Q96IY4	423 aa		13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	FAM81B	Q96LP2	452 aa		13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	NT5C1B	Q96P26	610 aa		13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	GPR88	Q9GZN0	384 aa		13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	HAUS4	Q9H6D7	363 aa		13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	DDX20	Q9UHI6	824 aa	Known RBP	13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	GTF2IRD1	Q9UHL9	959 aa		13.72	□□□□□ -0.21
CACNB3-223	ENST00000552480	SCN10A	Q9Y5Y9	1956 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480		A0A1B0GUA9	196 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	ZNF263	O14978	683 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	GFPT2	O94808	682 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	HLA-DRA	P01903	254 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	CLTA	P09496	248 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	DARS	P14868	501 aa	Known RBP	13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	ARHGAP25	P42331	645 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	PIK3CA	P42336	1068 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	VAV2	P52735	878 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	MFAP3	P55082	362 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	ETF1	P62495	437 aa	Known RBP	13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	TMEM62	Q0P6H9	643 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	BIRC3	Q13489	604 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	ENOX2	Q16206	610 aa	Known RBP	13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	ARHGAP44	Q17R89	818 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	DCAF4L1	Q3SXM0	396 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	ARHGAP29	Q52LW3	1261 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	ENOSF1	Q7L5Y1	443 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	CATSPER4	Q7RTX7	472 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	KIAA1328	Q86T90	577 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	SESTD1	Q86VW0	696 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	CDR2L	Q86X02	465 aa	Predicted RBP	13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	THNSL1	Q8IYQ7	743 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	TXLNB	Q8N3L3	684 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	PCSK9	Q8NBP7	692 aa	Known RBP	13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	OSMR	Q99650	979 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	ADPGK	Q9BRR6	497 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	RPF1	Q9H9Y2	349 aa	Known RBP	13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480	LZTFL1	Q9NQ48	299 aa		13.71	□□□□□ -0.21
CACNB3-223	ENST00000552480		A0A0U1RQJ8	604 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	EVI5	O60447	810 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	B4GALT4	O60513	344 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	LRRN2	O75325	713 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	VNN1	O95497	513 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	RPLP2	P05387	115 aa	Known RBP	13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	ASGR1	P07306	291 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	AXL	P30530	894 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	CRYBB1	P53674	252 aa	Predicted RBP	13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	PTK2	Q05397	1052 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	NCBP1	Q09161	790 aa	Known RBP	13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	KCNA10	Q16322	511 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	SLC18A3	Q16572	532 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	WDR44	Q5JSH3	913 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	SYT10	Q6XYQ8	523 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	VPS36	Q86VN1	386 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	CEP120	Q8N960	986 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	OR5B17	Q8NGF7	314 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	HELQ	Q8TDG4	1101 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	ATRIP	Q8WXE1	791 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	JAKMIP2	Q96AA8	810 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	IFIH1	Q9BYX4	1025 aa	Known RBP	13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	TSGA10	Q9BZW7	698 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	CDHR5	Q9HBB8	845 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	LUC7L	Q9NQ29	371 aa	Known RBP	13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	PAXBP1	Q9Y5B6	917 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	PCDHA13	Q9Y5I0	950 aa		13.7	□□□□□ -0.22
CACNB3-223	ENST00000552480	FOXN3	O00409	490 aa	Predicted RBP	13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	KRT86	O43790	486 aa		13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	KIF5C	O60282	957 aa		13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	PHACTR2	O75167	634 aa		13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	CABYR	O75952	493 aa		13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	INHA	P05111	366 aa		13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	STAG3L1	P0CL83	205 aa		13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	PNMA6A	P0CW24	399 aa	Predicted RBP	13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	FGFR4	P22455	802 aa		13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	EIF4B	P23588	611 aa	Known RBP	13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	MAGEA1	P43355	309 aa		13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	CYP27A1	Q02318	531 aa		13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	GCNT1	Q02742	428 aa		13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	GFPT1	Q06210	699 aa	Predicted RBP	13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	SNX17	Q15036	470 aa		13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	DUOXA2	Q1HG44	320 aa		13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	NOTUM	Q6P988	496 aa		13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	SLC27A1	Q6PCB7	646 aa		13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	RNF180	Q86T96	592 aa		13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	RSPH3	Q86UC2	560 aa		13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	PPM1K	Q8N3J5	372 aa		13.69	□□□□□ -0.22
CACNB3-223	ENST00000552480	KIF18A	Q8NI77	898 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms