RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 ECM2O94769 699 aaPredicted RBP20.61■□□□□ 0.89
BRF1-215ENST00000549655 VNN1O95497 513 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 CHRNB2P17787 502 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 TNFSF9P41273 254 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 DNA2P51530 1060 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 PTENP60484 403 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 MCL1Q07820 350 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 CCDC181Q5TID7 509 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 TAF3Q5VWG9 929 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 ZNF572Q7Z3I7 529 aaPredicted RBP20.61■□□□□ 0.89
BRF1-215ENST00000549655 RASAL3Q86YV0 1011 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 LMBR1Q8WVP7 490 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 FAM81BQ96LP2 452 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 INO80BQ9C086 356 aaPredicted RBP20.61■□□□□ 0.89
BRF1-215ENST00000549655 FZD8Q9H461 694 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 SLC5A4Q9NY91 659 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 ANKRD62A6NC57 917 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 IGF2BP3O00425 579 aaKnown RBP eCLIP20.61■□□□□ 0.89
BRF1-215ENST00000549655 ACKR2O00590 384 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 ABLIM1O14639 778 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 OGTO15294 1046 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 MAGEB2O15479 319 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 CYP11B1P15538 503 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 TSHZ1Q6ZSZ6 1077 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 BRSK2Q8IWQ3 736 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 SLC35G2Q8TBE7 412 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 RFFLQ8WZ73 363 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 THAP2Q9H0W7 228 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 GOLPH3Q9H4A6 298 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 RAB21Q9UL25 225 aa20.61■□□□□ 0.89
BRF1-215ENST00000549655 H3BRB1 525 aa20.6■□□□□ 0.89
BRF1-215ENST00000549655 C2orf54Q08AI8 447 aa20.6■□□□□ 0.89
BRF1-215ENST00000549655 IQSEC1Q6DN90 963 aa20.6■□□□□ 0.89
BRF1-215ENST00000549655 OR5B17Q8NGF7 314 aa20.6■□□□□ 0.89
BRF1-215ENST00000549655 PCDHB18PQ96TA0 734 aa20.6■□□□□ 0.89
BRF1-215ENST00000549655 ISCUQ9H1K1 167 aa20.6■□□□□ 0.89
BRF1-215ENST00000549655 TUT1Q9H6E5 874 aaKnown RBP20.6■□□□□ 0.89
BRF1-215ENST00000549655 OSGEPQ9NPF4 335 aa20.6■□□□□ 0.89
BRF1-215ENST00000549655 TRPM7Q96QT4 1865 aa20.6■□□□□ 0.89
BRF1-215ENST00000549655 FTLP02792 175 aaPredicted RBP20.59■□□□□ 0.89
BRF1-215ENST00000549655 KRT5P13647 590 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 PAFAH1B1P43034 410 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 PDE6CP51160 858 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 MBTD1Q05BQ5 628 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 BRD3Q15059 726 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 ATF7IP2Q5U623 682 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 CHADLQ6NUI6 762 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 OR6J1Q8NGC5 347 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 MINDY3Q9H8M7 445 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 SMARCAL1Q9NZC9 954 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 EHD2Q9NZN4 543 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 CCDC151A5D8V7 595 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 MANSC4A6NHS7 340 aaPredicted RBP20.59■□□□□ 0.89
BRF1-215ENST00000549655 B4GALT5O43286 388 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 MMP3P08254 477 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 MMEP08473 750 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 PROZP22891 400 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 FMO1Q01740 532 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 ITIH3Q06033 890 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 RPS6KA1Q15418 735 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 TAF1CQ15572 869 aaPredicted RBP20.59■□□□□ 0.89
BRF1-215ENST00000549655 SPOPLQ6IQ16 392 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 CC2D1AQ6P1N0 951 aaPredicted RBP20.59■□□□□ 0.89
BRF1-215ENST00000549655 MPZL3Q6UWV2 235 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 SLFN11Q7Z7L1 901 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 MSL3Q8N5Y2 521 aaKnown RBP20.59■□□□□ 0.89
BRF1-215ENST00000549655 LINC01465Q8N7H1 131 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 SPATA4Q8NEY3 305 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 ARHGEF26Q96DR7 871 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 MS4A14Q96JA4 679 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 NFKBIZQ9BYH8 718 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 PTPRHQ9HD43 1115 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 RNF216Q9NWF9 866 aaPredicted RBP20.59■□□□□ 0.89
BRF1-215ENST00000549655 COL1A2P08123 1366 aa20.59■□□□□ 0.89
BRF1-215ENST00000549655 DOCK3Q8IZD9 2030 aa20.58■□□□□ 0.89
BRF1-215ENST00000549655 PHACTR2O75167 634 aa20.58■□□□□ 0.89
BRF1-215ENST00000549655 RTN2O75298 545 aa20.58■□□□□ 0.89
BRF1-215ENST00000549655 SEC31AO94979 1220 aaKnown RBP20.58■□□□□ 0.89
BRF1-215ENST00000549655 CDR2Q01850 454 aa20.58■□□□□ 0.89
BRF1-215ENST00000549655 GRM1Q13255 1194 aa20.58■□□□□ 0.89
BRF1-215ENST00000549655 TMEM132AQ24JP5 1023 aa20.58■□□□□ 0.89
BRF1-215ENST00000549655 CFAP221Q4G0U5 840 aa20.58■□□□□ 0.89
BRF1-215ENST00000549655 MORN1Q5T089 497 aa20.58■□□□□ 0.89
BRF1-215ENST00000549655 DAAM2Q86T65 1068 aa20.58■□□□□ 0.89
BRF1-215ENST00000549655 SYCE1Q8N0S2 351 aa20.58■□□□□ 0.89
BRF1-215ENST00000549655 TAF4BQ92750 862 aa20.58■□□□□ 0.89
BRF1-215ENST00000549655 IFT122Q9HBG6 1241 aa20.58■□□□□ 0.89
BRF1-215ENST00000549655 RNF14Q9UBS8 474 aa20.58■□□□□ 0.89
BRF1-215ENST00000549655 CPSF3Q9UKF6 684 aaKnown RBP20.58■□□□□ 0.89
BRF1-215ENST00000549655 ZNF236Q9UL36 1845 aa20.58■□□□□ 0.89
BRF1-215ENST00000549655 ADCY6O43306 1168 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 ZRANB2O95218 330 aaKnown RBP eCLIP20.57■□□□□ 0.88
BRF1-215ENST00000549655 KIF4AO95239 1232 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 IQCF3P0C7M6 154 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 GZMAP12544 262 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 HOXD8P13378 290 aaPredicted RBP20.57■□□□□ 0.88
BRF1-215ENST00000549655 PHKA2P46019 1235 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 POU5F1BQ06416 359 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 DGKDQ16760 1214 aa20.57■□□□□ 0.88
BRF1-215ENST00000549655 PTPROQ16827 1216 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms