RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 TRIM67Q6ZTA4 783 aa20.45■□□□□ 0.86
CHMP1A-207ENST00000549328 BMP8AQ7Z5Y6 402 aa20.45■□□□□ 0.86
CHMP1A-207ENST00000549328 B3GALT6Q96L58 329 aa20.45■□□□□ 0.86
CHMP1A-207ENST00000549328 UROC1Q96N76 676 aa20.45■□□□□ 0.86
CHMP1A-207ENST00000549328 TCHPQ9BT92 498 aa20.45■□□□□ 0.86
CHMP1A-207ENST00000549328 PLEKHA4Q9H4M7 779 aa20.45■□□□□ 0.86
CHMP1A-207ENST00000549328 MAN1C1Q9NR34 630 aa20.45■□□□□ 0.86
CHMP1A-207ENST00000549328 TECTAO75443 2155 aa20.45■□□□□ 0.86
CHMP1A-207ENST00000549328 SMIM28A0A1B0GU29 152 aa20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 TMEM189-UBE2V1I3L0A0 370 aa20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 ABLIM1O14639 778 aa20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 TOM1L1O75674 476 aa20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 KIF4AO95239 1232 aa20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 PAPLNO95428 1278 aa20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 MAPTP10636 758 aaKnown RBP20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 SCP2P22307 547 aa20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 PTPN21Q16825 1174 aa20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 DCLRE1AQ6PJP8 1040 aa20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 ZPBP2Q6X784 338 aa20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 ZDHHC14Q8IZN3 488 aa20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 PLCD3Q8N3E9 789 aa20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 CEP120Q8N960 986 aa20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 PIK3R5Q8WYR1 880 aa20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 ACAP3Q96P50 834 aa20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 TTPALQ9BTX7 342 aa20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 CCSER1Q9C0I3 900 aa20.44■□□□□ 0.86
CHMP1A-207ENST00000549328 MYH11P35749 1972 aa20.43■□□□□ 0.86
CHMP1A-207ENST00000549328 C2CD4DB7Z1M9 353 aa20.43■□□□□ 0.86
CHMP1A-207ENST00000549328 SP100P23497 879 aaPredicted RBP20.43■□□□□ 0.86
CHMP1A-207ENST00000549328 GRIN1Q05586 938 aa20.43■□□□□ 0.86
CHMP1A-207ENST00000549328 GLRA4Q5JXX5 417 aa20.43■□□□□ 0.86
CHMP1A-207ENST00000549328 RTP2Q5QGT7 225 aa20.43■□□□□ 0.86
CHMP1A-207ENST00000549328 FAM171A1Q5VUB5 890 aa20.43■□□□□ 0.86
CHMP1A-207ENST00000549328 PDXDC1Q6P996 788 aa20.43■□□□□ 0.86
CHMP1A-207ENST00000549328 LILRA6Q6PI73 481 aa20.43■□□□□ 0.86
CHMP1A-207ENST00000549328 HFE2Q6ZVN8 426 aa20.43■□□□□ 0.86
CHMP1A-207ENST00000549328 ZBTB33Q86T24 672 aa20.43■□□□□ 0.86
CHMP1A-207ENST00000549328 HASPINQ8TF76 798 aa20.43■□□□□ 0.86
CHMP1A-207ENST00000549328 MFSD14AQ96MC6 490 aa20.43■□□□□ 0.86
CHMP1A-207ENST00000549328 BLOC1S4Q9NUP1 217 aa20.43■□□□□ 0.86
CHMP1A-207ENST00000549328 SLC38A7Q9NVC3 462 aa20.43■□□□□ 0.86
CHMP1A-207ENST00000549328 NPHP3-ACAD11A0A0J9YXS1 232 aa20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 CCDC195A0A1B0GUA6 201 aa20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 K7ELQ4 463 aaPredicted RBP20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 B3GAT3O94766 335 aa20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 KCNE1P15382 129 aa20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 PLCG1P19174 1290 aa20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 NCKAP1LP55160 1127 aa20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 SIGLEC14Q08ET2 396 aa20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 RESTQ13127 1097 aa20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 KARSQ15046 597 aaKnown RBP20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 PTPAQ15257 358 aa20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 UPP1Q16831 310 aa20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 CCDC149Q6ZUS6 474 aa20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 GPBP1Q86WP2 473 aa20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 PALB2Q86YC2 1186 aa20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 TDRD5Q8NAT2 981 aaKnown RBP20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 RASSF8Q8NHQ8 419 aa20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 DDX27Q96GQ7 796 aaKnown RBP20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 REEP2Q9BRK0 252 aa20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 CLIC4Q9Y696 253 aa20.42■□□□□ 0.86
CHMP1A-207ENST00000549328 TRIP11Q15643 1979 aa20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 TMEM221A6NGB7 291 aa20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 M0R296 226 aa20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 CLDN3O15551 220 aa20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 TGM5O43548 720 aa20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 TRAPPC3O43617 180 aa20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 DDIT3P35638 169 aa20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 ZNF131P52739 623 aa20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 OSTNP61366 133 aa20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 PRSS55Q6UWB4 352 aaPredicted RBP20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 OTOP3Q7RTS5 596 aa20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 HAUS6Q7Z4H7 955 aa20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 CEP57Q86XR8 500 aa20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 LNX1Q8TBB1 728 aaPredicted RBP20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 LRRC15Q8TF66 581 aa20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 RAD54LQ92698 747 aa20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 ACSF2Q96CM8 615 aaPredicted RBP20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 ZBTB45Q96K62 511 aaPredicted RBP20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 SNX27Q96L92 541 aa20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 ZDHHC7Q9NXF8 308 aa20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 SRPRBQ9Y5M8 271 aaKnown RBP20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 MORC2Q9Y6X9 1032 aaPredicted RBP20.41■□□□□ 0.86
CHMP1A-207ENST00000549328 RPL17P18621 184 aaKnown RBP20.4■□□□□ 0.86
CHMP1A-207ENST00000549328 FGFR3P22607 806 aa20.4■□□□□ 0.86
CHMP1A-207ENST00000549328 CLCNKBP51801 687 aa20.4■□□□□ 0.86
CHMP1A-207ENST00000549328 PLXNA3P51805 1871 aa20.4■□□□□ 0.86
CHMP1A-207ENST00000549328 CACNB1Q02641 598 aaPredicted RBP20.4■□□□□ 0.86
CHMP1A-207ENST00000549328 MCL1Q07820 350 aa20.4■□□□□ 0.86
CHMP1A-207ENST00000549328 DHX8Q14562 1220 aaKnown RBP20.4■□□□□ 0.86
CHMP1A-207ENST00000549328 MCM6Q14566 821 aa20.4■□□□□ 0.86
CHMP1A-207ENST00000549328 NOLC1Q14978 699 aaKnown RBP eCLIP20.4■□□□□ 0.86
CHMP1A-207ENST00000549328 PSMD5Q16401 504 aa20.4■□□□□ 0.86
CHMP1A-207ENST00000549328 FEZF2Q8TBJ5 459 aa20.4■□□□□ 0.86
CHMP1A-207ENST00000549328 LARP4BQ92615 738 aaKnown RBP20.4■□□□□ 0.86
CHMP1A-207ENST00000549328 CLSTN3Q9BQT9 956 aa20.4■□□□□ 0.86
CHMP1A-207ENST00000549328 KCNH6Q9H252 994 aa20.4■□□□□ 0.86
CHMP1A-207ENST00000549328 ZSCAN16Q9H4T2 348 aaPredicted RBP20.4■□□□□ 0.86
CHMP1A-207ENST00000549328 PARVGQ9HBI0 331 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms