RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 LILRA6Q6PI73 481 aa22.43■■□□□ 1.18
SSH1-207ENST00000547862 CCDC105Q8IYK2 499 aa22.43■■□□□ 1.18
SSH1-207ENST00000547862 SNX29Q8TEQ0 813 aa22.43■■□□□ 1.18
SSH1-207ENST00000547862 PIK3R5Q8WYR1 880 aa22.43■■□□□ 1.18
SSH1-207ENST00000547862 RHOBTB2Q9BYZ6 727 aa22.43■■□□□ 1.18
SSH1-207ENST00000547862 DDX19AQ9NUU7 478 aaKnown RBP22.43■■□□□ 1.18
SSH1-207ENST00000547862 KIAA1024Q9UPX6 916 aa22.43■■□□□ 1.18
SSH1-207ENST00000547862 CFAP54Q96N23 3096 aa22.43■■□□□ 1.18
SSH1-207ENST00000547862 COL4A3Q01955 1670 aa22.42■■□□□ 1.18
SSH1-207ENST00000547862 PRR23AA6NEV1 266 aa22.42■■□□□ 1.18
SSH1-207ENST00000547862 EIF5BO60841 1220 aaKnown RBP22.42■■□□□ 1.18
SSH1-207ENST00000547862 SRFP11831 508 aa22.42■■□□□ 1.18
SSH1-207ENST00000547862 FSHRP23945 695 aa22.42■■□□□ 1.18
SSH1-207ENST00000547862 ATF7IP2Q5U623 682 aa22.42■■□□□ 1.18
SSH1-207ENST00000547862 SLC44A3Q8N4M1 653 aa22.42■■□□□ 1.18
SSH1-207ENST00000547862 LNX1Q8TBB1 728 aaPredicted RBP22.42■■□□□ 1.18
SSH1-207ENST00000547862 GPR152Q8TDT2 470 aa22.42■■□□□ 1.18
SSH1-207ENST00000547862 RTP3Q9BQQ7 232 aa22.42■■□□□ 1.18
SSH1-207ENST00000547862 CLSTN3Q9BQT9 956 aa22.42■■□□□ 1.18
SSH1-207ENST00000547862 LLPHQ9BRT6 129 aaKnown RBP22.42■■□□□ 1.18
SSH1-207ENST00000547862 TBC1D17Q9HA65 648 aa22.42■■□□□ 1.18
SSH1-207ENST00000547862 GOLGA2P5Q9HBQ8 144 aa22.42■■□□□ 1.18
SSH1-207ENST00000547862 LRWD1Q9UFC0 647 aa22.42■■□□□ 1.18
SSH1-207ENST00000547862 NUMBLQ9Y6R0 609 aa22.42■■□□□ 1.18
SSH1-207ENST00000547862 PDCD11Q14690 1871 aaKnown RBP22.41■■□□□ 1.18
SSH1-207ENST00000547862 VPS13AQ96RL7 3174 aa22.41■■□□□ 1.18
SSH1-207ENST00000547862 CCDC169A6NNP5 214 aa22.41■■□□□ 1.18
SSH1-207ENST00000547862 LAMP2P13473 410 aa22.41■■□□□ 1.18
SSH1-207ENST00000547862 IGFBP6P24592 240 aaPredicted RBP22.41■■□□□ 1.18
SSH1-207ENST00000547862 NBL1P41271 181 aa22.41■■□□□ 1.18
SSH1-207ENST00000547862 RBM25P49756 843 aaKnown RBP22.41■■□□□ 1.18
SSH1-207ENST00000547862 OSTNP61366 133 aa22.41■■□□□ 1.18
SSH1-207ENST00000547862 HMGN5P82970 282 aaKnown RBP22.41■■□□□ 1.18
SSH1-207ENST00000547862 ANGPT1Q15389 498 aa22.41■■□□□ 1.18
SSH1-207ENST00000547862 NAB2Q15742 525 aa22.41■■□□□ 1.18
SSH1-207ENST00000547862 SPECC1Q5M775 1068 aa22.41■■□□□ 1.18
SSH1-207ENST00000547862 NT5DC1Q5TFE4 455 aa22.41■■□□□ 1.18
SSH1-207ENST00000547862 GPR65Q8IYL9 337 aa22.41■■□□□ 1.18
SSH1-207ENST00000547862 DTWD2Q8NBA8 298 aa22.41■■□□□ 1.18
SSH1-207ENST00000547862 FBXO18Q8NFZ0 1043 aa22.41■■□□□ 1.18
SSH1-207ENST00000547862 SLC7A14Q8TBB6 771 aa22.41■■□□□ 1.18
SSH1-207ENST00000547862 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.41■■□□□ 1.18
SSH1-207ENST00000547862 PP2D1A8MPX8 630 aa22.4■■□□□ 1.18
SSH1-207ENST00000547862 PROB1E7EW31 1015 aa22.4■■□□□ 1.18
SSH1-207ENST00000547862 I3L4J1 428 aa22.4■■□□□ 1.18
SSH1-207ENST00000547862 FXR2P51116 673 aaKnown RBP eCLIP22.4■■□□□ 1.18
SSH1-207ENST00000547862 ELAVL2Q12926 359 aaKnown RBP22.4■■□□□ 1.18
SSH1-207ENST00000547862 HTR4Q13639 388 aa22.4■■□□□ 1.18
SSH1-207ENST00000547862 CEP120Q8N960 986 aa22.4■■□□□ 1.18
SSH1-207ENST00000547862 KIFAP3Q92845 792 aa22.4■■□□□ 1.18
SSH1-207ENST00000547862 WNT16Q9UBV4 365 aa22.4■■□□□ 1.18
SSH1-207ENST00000547862 PHLPP2Q6ZVD8 1323 aa22.39■■□□□ 1.18
SSH1-207ENST00000547862 B3GAT3O94766 335 aa22.39■■□□□ 1.17
SSH1-207ENST00000547862 HARSP12081 509 aaKnown RBP22.39■■□□□ 1.17
SSH1-207ENST00000547862 CLCNKBP51801 687 aa22.39■■□□□ 1.17
SSH1-207ENST00000547862 EFNA5P52803 228 aa22.39■■□□□ 1.17
SSH1-207ENST00000547862 PEX3P56589 373 aa22.39■■□□□ 1.17
SSH1-207ENST00000547862 ZNF568Q3ZCX4 644 aa22.39■■□□□ 1.17
SSH1-207ENST00000547862 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.39■■□□□ 1.17
SSH1-207ENST00000547862 NKD2Q969F2 451 aaPredicted RBP22.39■■□□□ 1.17
SSH1-207ENST00000547862 ARHGEF3Q9NR81 526 aa22.39■■□□□ 1.17
SSH1-207ENST00000547862 NOTCH4Q99466 2003 aa22.38■■□□□ 1.17
SSH1-207ENST00000547862 E9PMD0 336 aa22.38■■□□□ 1.17
SSH1-207ENST00000547862 TKTP29401 623 aaKnown RBP22.38■■□□□ 1.17
SSH1-207ENST00000547862 OR1D2P34982 312 aa22.38■■□□□ 1.17
SSH1-207ENST00000547862 BRCC3P46736 316 aa22.38■■□□□ 1.17
SSH1-207ENST00000547862 PTGDRQ13258 359 aa22.38■■□□□ 1.17
SSH1-207ENST00000547862 ZRSR1Q15695 479 aaKnown RBP22.38■■□□□ 1.17
SSH1-207ENST00000547862 APBB1IPQ7Z5R6 666 aaPredicted RBP22.38■■□□□ 1.17
SSH1-207ENST00000547862 PPP1R10Q96QC0 940 aaKnown RBP22.38■■□□□ 1.17
SSH1-207ENST00000547862 HCFC1R1Q9NWW0 138 aa22.38■■□□□ 1.17
SSH1-207ENST00000547862 PCDHB6Q9Y5E3 794 aa22.38■■□□□ 1.17
SSH1-207ENST00000547862 K7ERI5 159 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 HIP1RO75146 1068 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 XYLBO75191 536 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 C1RP00736 705 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 DCNP07585 359 aaKnown RBP22.37■■□□□ 1.17
SSH1-207ENST00000547862 HNRNPA1P09651 372 aaKnown RBP eCLIP22.37■■□□□ 1.17
SSH1-207ENST00000547862 MUTP22033 750 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 TRAPPC10P48553 1259 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 YARSP54577 528 aaKnown RBP22.37■■□□□ 1.17
SSH1-207ENST00000547862 DMP1Q13316 513 aaPredicted RBP22.37■■□□□ 1.17
SSH1-207ENST00000547862 AXDND1Q5T1B0 1012 aaPredicted RBP22.37■■□□□ 1.17
SSH1-207ENST00000547862 PDXDC1Q6P996 788 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 PARM1Q6UWI2 310 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 C4orf32Q8N8J7 132 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 C3orf58Q8NDZ4 430 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 ITFG1Q8TB96 612 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 ING5Q8WYH8 240 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 FGF14Q92915 247 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 NXPE3Q969Y0 559 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 ZSCAN31Q96LW9 406 aaPredicted RBP22.37■■□□□ 1.17
SSH1-207ENST00000547862 RPP25Q9BUL9 199 aaKnown RBP22.37■■□□□ 1.17
SSH1-207ENST00000547862 RUSC1Q9BVN2 902 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 CCDC94Q9BW85 323 aaPredicted RBP22.37■■□□□ 1.17
SSH1-207ENST00000547862 RAB34Q9BZG1 259 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 CDT1Q9H211 546 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 CDY1Q9Y6F8 540 aa22.37■■□□□ 1.17
SSH1-207ENST00000547862 ANHXE9PGG2 379 aa22.36■■□□□ 1.17
SSH1-207ENST00000547862 PAPLNO95428 1278 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms