RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 KANSL1LA0AUZ9 987 aa16.02■□□□□ 0.16
USP15-206ENST00000546718 LRRIQ4A6NIV6 560 aa16.02■□□□□ 0.16
USP15-206ENST00000546718 ABCB7O75027 752 aa16.02■□□□□ 0.16
USP15-206ENST00000546718 BAG4O95429 457 aaKnown RBP16.02■□□□□ 0.16
USP15-206ENST00000546718 HOXA9P31269 272 aa16.02■□□□□ 0.16
USP15-206ENST00000546718 MLF2Q15773 248 aaPredicted RBP16.02■□□□□ 0.16
USP15-206ENST00000546718 PPM1LQ5SGD2 360 aa16.02■□□□□ 0.16
USP15-206ENST00000546718 CEP57Q86XR8 500 aa16.02■□□□□ 0.16
USP15-206ENST00000546718 SLC7A14Q8TBB6 771 aa16.02■□□□□ 0.16
USP15-206ENST00000546718 SHDQ96IW2 340 aa16.02■□□□□ 0.16
USP15-206ENST00000546718 KXD1Q9BQD3 176 aa16.02■□□□□ 0.16
USP15-206ENST00000546718 PDZD7Q9H5P4 517 aa16.02■□□□□ 0.16
USP15-206ENST00000546718 PDRG1Q9NUG6 133 aa16.02■□□□□ 0.16
USP15-206ENST00000546718 HCFC1R1Q9NWW0 138 aa16.02■□□□□ 0.16
USP15-206ENST00000546718 PCDHA12Q9UN75 941 aa16.02■□□□□ 0.16
USP15-206ENST00000546718 EPB41L2O43491 1005 aaKnown RBP16.01■□□□□ 0.15
USP15-206ENST00000546718 RECQL4O94761 1208 aa16.01■□□□□ 0.15
USP15-206ENST00000546718 EDN1P05305 212 aa16.01■□□□□ 0.15
USP15-206ENST00000546718 XBP1P17861 261 aa16.01■□□□□ 0.15
USP15-206ENST00000546718 CD72P21854 359 aa16.01■□□□□ 0.15
USP15-206ENST00000546718 IGFBP6P24592 240 aaPredicted RBP16.01■□□□□ 0.15
USP15-206ENST00000546718 PUM1Q14671 1186 aaKnown RBP eCLIP16.01■□□□□ 0.15
USP15-206ENST00000546718 CALCRLQ16602 461 aa16.01■□□□□ 0.15
USP15-206ENST00000546718 ZNF528Q3MIS6 628 aa16.01■□□□□ 0.15
USP15-206ENST00000546718 MTSS1LQ765P7 747 aa16.01■□□□□ 0.15
USP15-206ENST00000546718 NPAS3Q8IXF0 933 aa16.01■□□□□ 0.15
USP15-206ENST00000546718 PRIMPOLQ96LW4 560 aa16.01■□□□□ 0.15
USP15-206ENST00000546718 CCDC43Q96MW1 224 aaKnown RBP16.01■□□□□ 0.15
USP15-206ENST00000546718 FZD8Q9H461 694 aa16.01■□□□□ 0.15
USP15-206ENST00000546718 TTC12Q9H892 705 aaPredicted RBP16.01■□□□□ 0.15
USP15-206ENST00000546718 PRMT7Q9NVM4 692 aaPredicted RBP16.01■□□□□ 0.15
USP15-206ENST00000546718 TPCN1Q9ULQ1 816 aa16.01■□□□□ 0.15
USP15-206ENST00000546718 POLIQ9UNA4 740 aa16.01■□□□□ 0.15
USP15-206ENST00000546718 PFKFB2O60825 505 aa16■□□□□ 0.15
USP15-206ENST00000546718 KINO60870 393 aaKnown RBP16■□□□□ 0.15
USP15-206ENST00000546718 POU2F2P09086 479 aa16■□□□□ 0.15
USP15-206ENST00000546718 FDPSP14324 419 aaKnown RBP16■□□□□ 0.15
USP15-206ENST00000546718 PRKCQQ04759 706 aa16■□□□□ 0.15
USP15-206ENST00000546718 UBXN2BQ14CS0 331 aa16■□□□□ 0.15
USP15-206ENST00000546718 FAM187BQ17R55 369 aa16■□□□□ 0.15
USP15-206ENST00000546718 SLC44A4Q53GD3 710 aa16■□□□□ 0.15
USP15-206ENST00000546718 AXDND1Q5T1B0 1012 aaPredicted RBP16■□□□□ 0.15
USP15-206ENST00000546718 RSPO2Q6UXX9 243 aaPredicted RBP16■□□□□ 0.15
USP15-206ENST00000546718 MAEAQ7L5Y9 396 aa16■□□□□ 0.15
USP15-206ENST00000546718 BSNDQ8WZ55 320 aa16■□□□□ 0.15
USP15-206ENST00000546718 BCO2Q9BYV7 579 aa16■□□□□ 0.15
USP15-206ENST00000546718 SPATA6Q9NWH7 488 aaPredicted RBP16■□□□□ 0.15
USP15-206ENST00000546718 SNTG2Q9NY99 539 aa16■□□□□ 0.15
USP15-206ENST00000546718 FBXO4Q9UKT5 387 aa16■□□□□ 0.15
USP15-206ENST00000546718 USP20Q9Y2K6 914 aa16■□□□□ 0.15
USP15-206ENST00000546718 CFAP47Q6ZTR5 3102 aa15.99■□□□□ 0.15
USP15-206ENST00000546718 SPTBN2O15020 2390 aa15.99■□□□□ 0.15
USP15-206ENST00000546718 SPTLC1O15269 473 aa15.99■□□□□ 0.15
USP15-206ENST00000546718 NEMFO60524 1076 aa15.99■□□□□ 0.15
USP15-206ENST00000546718 XYLBO75191 536 aa15.99■□□□□ 0.15
USP15-206ENST00000546718 THP07101 528 aa15.99■□□□□ 0.15
USP15-206ENST00000546718 SPATA31C1P0DKV0 1188 aa15.99■□□□□ 0.15
USP15-206ENST00000546718 OR1D2P34982 312 aa15.99■□□□□ 0.15
USP15-206ENST00000546718 KRT2P35908 639 aa15.99■□□□□ 0.15
USP15-206ENST00000546718 TXKP42681 527 aa15.99■□□□□ 0.15
USP15-206ENST00000546718 RAB33AQ14088 237 aa15.99■□□□□ 0.15
USP15-206ENST00000546718 PABPC1LQ4VXU2 614 aaKnown RBP15.99■□□□□ 0.15
USP15-206ENST00000546718 NOSTRINQ8IVI9 506 aa15.99■□□□□ 0.15
USP15-206ENST00000546718 ING5Q8WYH8 240 aa15.99■□□□□ 0.15
USP15-206ENST00000546718 MTMR9Q96QG7 549 aa15.99■□□□□ 0.15
USP15-206ENST00000546718 OSBPL6Q9BZF3 934 aa15.99■□□□□ 0.15
USP15-206ENST00000546718 CCDC113Q9H0I3 377 aa15.99■□□□□ 0.15
USP15-206ENST00000546718 LTB4R2Q9NPC1 389 aa15.99■□□□□ 0.15
USP15-206ENST00000546718 DNMT3BQ9UBC3 853 aaKnown RBP15.99■□□□□ 0.15
USP15-206ENST00000546718 ORC3Q9UBD5 711 aaPredicted RBP15.99■□□□□ 0.15
USP15-206ENST00000546718 SHISA7A6NL88 538 aa15.98■□□□□ 0.15
USP15-206ENST00000546718 FAM170BA6NMN3 283 aa15.98■□□□□ 0.15
USP15-206ENST00000546718 N4BP3O15049 544 aa15.98■□□□□ 0.15
USP15-206ENST00000546718 LAMTOR5O43504 91 aa15.98■□□□□ 0.15
USP15-206ENST00000546718 COL4A2P08572 1712 aa15.98■□□□□ 0.15
USP15-206ENST00000546718 FGFR3P22607 806 aa15.98■□□□□ 0.15
USP15-206ENST00000546718 ELAVL2Q12926 359 aaKnown RBP15.98■□□□□ 0.15
USP15-206ENST00000546718 RSPO4Q2I0M5 234 aaPredicted RBP15.98■□□□□ 0.15
USP15-206ENST00000546718 SLC5A9Q2M3M2 681 aa15.98■□□□□ 0.15
USP15-206ENST00000546718 EEF1DP3Q658K8 133 aa15.98■□□□□ 0.15
USP15-206ENST00000546718 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.98■□□□□ 0.15
USP15-206ENST00000546718 MTRRQ9UBK8 725 aa15.98■□□□□ 0.15
USP15-206ENST00000546718 PCDHGA2Q9Y5H1 932 aa15.98■□□□□ 0.15
USP15-206ENST00000546718 TARSP26639 723 aaKnown RBP15.97■□□□□ 0.15
USP15-206ENST00000546718 PFKPQ01813 784 aa15.97■□□□□ 0.15
USP15-206ENST00000546718 CSTF1Q05048 431 aaKnown RBP15.97■□□□□ 0.15
USP15-206ENST00000546718 PRPF4BQ13523 1007 aaKnown RBP15.97■□□□□ 0.15
USP15-206ENST00000546718 GLRA4Q5JXX5 417 aa15.97■□□□□ 0.15
USP15-206ENST00000546718 PDXDC1Q6P996 788 aa15.97■□□□□ 0.15
USP15-206ENST00000546718 CD300LGQ6UXG3 332 aa15.97■□□□□ 0.15
USP15-206ENST00000546718 TPRG1Q6ZUI0 275 aa15.97■□□□□ 0.15
USP15-206ENST00000546718 CATSPER3Q86XQ3 398 aa15.97■□□□□ 0.15
USP15-206ENST00000546718 ZBTB8OSQ8IWT0 167 aa15.97■□□□□ 0.15
USP15-206ENST00000546718 ZBTB44Q8NCP5 570 aa15.97■□□□□ 0.15
USP15-206ENST00000546718 C3orf58Q8NDZ4 430 aa15.97■□□□□ 0.15
USP15-206ENST00000546718 MCPH1Q8NEM0 835 aa15.97■□□□□ 0.15
USP15-206ENST00000546718 NELL1Q92832 810 aa15.97■□□□□ 0.15
USP15-206ENST00000546718 CLDN23Q96B33 292 aa15.97■□□□□ 0.15
USP15-206ENST00000546718 TMEM60Q9H2L4 133 aa15.97■□□□□ 0.15
USP15-206ENST00000546718 KCNH3Q9ULD8 1083 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms