RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 FAM110CQ1W6H9 321 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 MFSD6Q6ZSS7 791 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 TBC1D1Q86TI0 1168 aaPredicted RBP5.63□□□□□ -1.51
USP28-213ENST00000544967 ERICH1Q86X53 443 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 PLPP6Q8IY26 295 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 SYMPKQ92797 1274 aaKnown RBP5.63□□□□□ -1.51
USP28-213ENST00000544967 MAGOHBQ96A72 148 aaKnown RBP5.63□□□□□ -1.51
USP28-213ENST00000544967 RUNDC3BQ96NL0 473 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 OLFM3Q96PB7 478 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 TUBGCP2Q9BSJ2 902 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 REPIN1Q9BWE0 567 aaKnown RBP5.63□□□□□ -1.51
USP28-213ENST00000544967 ARHGAP20Q9P2F6 1191 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 PARP2Q9UGN5 583 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 FEM1BQ9UK73 627 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 NOVA2Q9UNW9 492 aaKnown RBP5.63□□□□□ -1.51
USP28-213ENST00000544967 ZNF510Q9Y2H8 683 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 SIK3Q9Y2K2 1263 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 USP20Q9Y2K6 914 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 ZNF536O15090 1300 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 LOXHD1Q8IVV2 1947 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 A0A087X0B3 334 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 MACROD2A1Z1Q3 448 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 LAD1O00515 517 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 TMCC1O94876 653 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 TPBGLP0DKB5 382 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 SKIP12755 728 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 TMOD1P28289 359 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 HPDP32754 393 aaPredicted RBP5.63□□□□□ -1.51
USP28-213ENST00000544967 DSG3P32926 999 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 USP11P51784 963 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 ZNF132P52740 706 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 STX17P56962 302 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 MYBPC3Q14896 1274 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 SLC4A8Q2Y0W8 1093 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 TKFCQ3LXA3 575 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 HSP90AA4PQ58FG1 418 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 DAB2IPQ5VWQ8 1189 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 KLHL10Q6JEL2 608 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 CYP4F22Q6NT55 531 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 MIGA2Q7L4E1 593 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 FAM160B2Q86V87 743 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 STAG2Q8N3U4 1231 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 TNFRSF25Q93038 417 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 FGD4Q96M96 766 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 ZIC5Q96T25 663 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 NAP1L3Q99457 506 aaPredicted RBP5.63□□□□□ -1.51
USP28-213ENST00000544967 PARK7Q99497 189 aaKnown RBP5.63□□□□□ -1.51
USP28-213ENST00000544967 SPZ1Q9BXG8 430 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 ADAM7Q9H2U9 754 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 RIOX1Q9H6W3 641 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 DCLRE1BQ9H816 532 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 PPCSQ9HAB8 311 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 STOML1Q9UBI4 398 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 DNAJB4Q9UDY4 337 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 L3MBTL1Q9Y468 752 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 PCDHB6Q9Y5E3 794 aa5.63□□□□□ -1.51
USP28-213ENST00000544967 SPDYE16A6NNV3 312 aaPredicted RBP5.62□□□□□ -1.51
USP28-213ENST00000544967 BTBD18B2RXH4 712 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 USP17L15C9J2P7 530 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 USP17L13C9JLJ4 530 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 USP17L11C9JVI0 530 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 USP17L18D6R9N7 530 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 USP17L22D6RA61 530 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 USP17L17D6RBQ6 530 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 USP17L19D6RCP7 530 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 USP17L20D6RJB6 530 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 ATP9BO43861 1147 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 GFPT2O94808 682 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 UBOX5O94941 541 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 MOCS3O95396 460 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 PYGLP06737 847 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 SLURP2P0DP57 97 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 COL6A1P12109 1028 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 KRT2P35908 639 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 SCNN1AP37088 669 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 PRCPP42785 496 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 PSMD7P51665 324 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 SLC18A1P54219 525 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 GRIN1Q05586 938 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 ZNF543Q08ER8 600 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 USP17L24Q0WX57 530 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 PTK7Q13308 1070 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 SNX1Q13596 522 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 DBN1Q16643 649 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 SLC35G1Q2M3R5 365 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 ASPRV1Q53RT3 343 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 ODF2Q5BJF6 829 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 MORN1Q5T089 497 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 TREML2Q5T2D2 321 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 PPP1R18Q6NYC8 613 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 CNNM4Q6P4Q7 775 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 RGS9BPQ6ZS82 235 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 ZNF467Q7Z7K2 595 aaPredicted RBP5.62□□□□□ -1.51
USP28-213ENST00000544967 CHPFQ8IZ52 775 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 CRACR2BQ8N4Y2 399 aaPredicted RBP5.62□□□□□ -1.51
USP28-213ENST00000544967 PAF1Q8N7H5 531 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 PIGOQ8TEQ8 1089 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 RMDN2Q96LZ7 410 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 TUBB6Q9BUF5 446 aa5.62□□□□□ -1.51
USP28-213ENST00000544967 PHF20Q9BVI0 1012 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms