RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 MSL3Q8N5Y2 521 aaKnown RBP7.2□□□□□ -1.26
CPSF7-222ENST00000544585 ZNF655Q8N720 491 aaPredicted RBP7.2□□□□□ -1.26
CPSF7-222ENST00000544585 PCSK9Q8NBP7 692 aaKnown RBP7.2□□□□□ -1.26
CPSF7-222ENST00000544585 DAGLBQ8NCG7 672 aa7.2□□□□□ -1.26
CPSF7-222ENST00000544585 UTP4Q969X6 686 aaKnown RBP7.2□□□□□ -1.26
CPSF7-222ENST00000544585 LENG1Q96BZ8 264 aaPredicted RBP7.2□□□□□ -1.26
CPSF7-222ENST00000544585 FCRL3Q96P31 734 aaPredicted RBP7.2□□□□□ -1.26
CPSF7-222ENST00000544585 MEIS3Q99687 375 aa7.2□□□□□ -1.26
CPSF7-222ENST00000544585 CELF4Q9BZC1 486 aaKnown RBP7.2□□□□□ -1.26
CPSF7-222ENST00000544585 MTIF3Q9H2K0 278 aaKnown RBP7.2□□□□□ -1.26
CPSF7-222ENST00000544585 PRDM12Q9H4Q4 367 aa7.2□□□□□ -1.26
CPSF7-222ENST00000544585 SLC28A3Q9HAS3 691 aa7.2□□□□□ -1.26
CPSF7-222ENST00000544585 ARNT2Q9HBZ2 717 aa7.2□□□□□ -1.26
CPSF7-222ENST00000544585 EMC7Q9NPA0 242 aa7.2□□□□□ -1.26
CPSF7-222ENST00000544585 C1GALT1Q9NS00 363 aa7.2□□□□□ -1.26
CPSF7-222ENST00000544585 CLEC1BQ9P126 229 aa7.2□□□□□ -1.26
CPSF7-222ENST00000544585 B4GALT6Q9UBX8 382 aa7.2□□□□□ -1.26
CPSF7-222ENST00000544585 IP6K2Q9UHH9 426 aa7.2□□□□□ -1.26
CPSF7-222ENST00000544585 RAPGEFL1Q9UHV5 662 aa7.2□□□□□ -1.26
CPSF7-222ENST00000544585 TMEFF2Q9UIK5 374 aaPredicted RBP7.2□□□□□ -1.26
CPSF7-222ENST00000544585 FAM184BQ9ULE4 1060 aa7.2□□□□□ -1.26
CPSF7-222ENST00000544585 CNPY2Q9Y2B0 182 aa7.2□□□□□ -1.26
CPSF7-222ENST00000544585 LUC7L2Q9Y383 392 aaKnown RBP7.2□□□□□ -1.26
CPSF7-222ENST00000544585 NCOR1O75376 2440 aa7.2□□□□□ -1.26
CPSF7-222ENST00000544585 SHISA3A0PJX4 238 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 MPHOSPH10O00566 681 aaKnown RBP7.19□□□□□ -1.26
CPSF7-222ENST00000544585 IPO8O15397 1037 aaKnown RBP7.19□□□□□ -1.26
CPSF7-222ENST00000544585 LEFTY1O75610 366 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 FLOT1O75955 427 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 ABLIM3O94929 683 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 SNUPNO95149 360 aaKnown RBP7.19□□□□□ -1.26
CPSF7-222ENST00000544585 ZNF865P0CJ78 1059 aaPredicted RBP7.19□□□□□ -1.26
CPSF7-222ENST00000544585 GUCY1A2P33402 732 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 SHMT1P34896 483 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 COPB2P35606 906 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 DNM2P50570 870 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 CDK7P50613 346 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 PLCD1P51178 756 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 NRG1Q02297 640 aaPredicted RBP7.19□□□□□ -1.26
CPSF7-222ENST00000544585 SEPT2Q15019 361 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 KCNA10Q16322 511 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 ZNF792Q3KQV3 632 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 EEF1DP3Q658K8 133 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 ZNF787Q6DD87 383 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 PSRC1Q6PGN9 363 aaPredicted RBP7.19□□□□□ -1.26
CPSF7-222ENST00000544585 ZNF365Q70YC5 407 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 C16orf59Q7L2K0 433 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 RIOX2Q8IUF8 465 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 MAGEB6Q8N7X4 407 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 CHST14Q8NCH0 376 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 KLHDC9Q8NEP7 349 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 PCDH19Q8TAB3 1148 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 PIWIL2Q8TC59 973 aaKnown RBP7.19□□□□□ -1.26
CPSF7-222ENST00000544585 PANK1Q8TE04 598 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 CHTF18Q8WVB6 975 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 HERVK_113Q902F9 699 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 AHCYL2Q96HN2 611 aaKnown RBP7.19□□□□□ -1.26
CPSF7-222ENST00000544585 GLT1D1Q96MS3 346 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 UBL7Q96S82 380 aaPredicted RBP7.19□□□□□ -1.26
CPSF7-222ENST00000544585 MMP19Q99542 508 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 HDAC8Q9BY41 377 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 SEZ6LQ9BYH1 1024 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 KCNF1Q9H3M0 494 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 SH2D4AQ9H788 454 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 GTF2IRD1Q9UHL9 959 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 ADAMTS5Q9UNA0 930 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 FPGT-TNNI3KV9GXZ4 949 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 RLFQ13129 1914 aa7.19□□□□□ -1.26
CPSF7-222ENST00000544585 SMCHD1A6NHR9 2005 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 TRBV23OR9-2A0A075B6M9 112 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.18□□□□□ -1.26
CPSF7-222ENST00000544585 A0A1W2PRG0 241 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 GRXCR1A8MXD5 290 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 K7ESF4 209 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 ADAMTS4O75173 837 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 DUSP11O75319 330 aaKnown RBP7.18□□□□□ -1.26
CPSF7-222ENST00000544585 IDH1O75874 414 aaKnown RBP7.18□□□□□ -1.26
CPSF7-222ENST00000544585 CKMP06732 381 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 FAM87AP0C7U9 286 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 PAMP19021 973 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 GABPAQ06546 454 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 BRD3Q15059 726 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 RCSD1Q6JBY9 416 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 CXorf57Q6NSI4 855 aaKnown RBP7.18□□□□□ -1.26
CPSF7-222ENST00000544585 TMEM179Q6ZVK1 233 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 CCDC103Q8IW40 242 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 TRMT2AQ8IZ69 625 aaKnown RBP7.18□□□□□ -1.26
CPSF7-222ENST00000544585 MIGA1Q8NAN2 632 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 FBXW5Q969U6 566 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 TCTN2Q96GX1 697 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 MYRFLQ96LU7 910 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 CCDC17Q96LX7 622 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 DBNDD2Q9BQY9 259 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 RHOBTB2Q9BYZ6 727 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 SPTLC3Q9NUV7 552 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 SWAP70Q9UH65 585 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 TBX21Q9UL17 535 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 TMX2Q9Y320 296 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 COMMD10Q9Y6G5 202 aa7.18□□□□□ -1.26
CPSF7-222ENST00000544585 NPHP3-ACAD11A0A0J9YXS1 232 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms