RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 TXNRD3NBQ6F5E7 133 aa4.04□□□□□ -1.76
BRCA2-206ENST00000544455 ANKS1BQ7Z6G8 1248 aa4.04□□□□□ -1.76
BRCA2-206ENST00000544455 DEPTORQ8TB45 409 aa4.04□□□□□ -1.76
BRCA2-206ENST00000544455 LMBR1Q8WVP7 490 aa4.04□□□□□ -1.76
BRCA2-206ENST00000544455 RNF25Q96BH1 459 aaPredicted RBP4.04□□□□□ -1.76
BRCA2-206ENST00000544455 MTMR12Q9C0I1 747 aa4.04□□□□□ -1.76
BRCA2-206ENST00000544455 UTP11Q9Y3A2 253 aaKnown RBP4.04□□□□□ -1.76
BRCA2-206ENST00000544455 MROH7Q68CQ1 1323 aa4.04□□□□□ -1.76
BRCA2-206ENST00000544455 SSC5DA1L4H1 1573 aa4.04□□□□□ -1.76
BRCA2-206ENST00000544455 K7ERI5 159 aa4.04□□□□□ -1.76
BRCA2-206ENST00000544455 BANF1O75531 89 aa4.04□□□□□ -1.76
BRCA2-206ENST00000544455 ITGBL1O95965 494 aaPredicted RBP4.04□□□□□ -1.76
BRCA2-206ENST00000544455 ETS1P14921 441 aa4.04□□□□□ -1.76
BRCA2-206ENST00000544455 UBA1P22314 1058 aaKnown RBP4.04□□□□□ -1.76
BRCA2-206ENST00000544455 RPL21P46778 160 aaKnown RBP4.04□□□□□ -1.76
BRCA2-206ENST00000544455 CLCN3P51790 818 aa4.04□□□□□ -1.76
BRCA2-206ENST00000544455 CCDC137Q6PK04 289 aaKnown RBP4.04□□□□□ -1.76
BRCA2-206ENST00000544455 JAMLQ86YT9 394 aa4.04□□□□□ -1.76
BRCA2-206ENST00000544455 MAGOHBQ96A72 148 aaKnown RBP4.04□□□□□ -1.76
BRCA2-206ENST00000544455 HOXC10Q9NYD6 342 aa4.04□□□□□ -1.76
BRCA2-206ENST00000544455 RBAKQ9NYW8 714 aaPredicted RBP4.04□□□□□ -1.76
BRCA2-206ENST00000544455 OATP04181 439 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 SUPT20HL2P0C7V6 817 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 KRT10P13645 584 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 SCP2P22307 547 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 AARSP49588 968 aaKnown RBP eCLIP4.03□□□□□ -1.76
BRCA2-206ENST00000544455 NRLP54845 237 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 TAS2R40P59535 323 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 CETN1Q12798 172 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 SUPT20HL1Q3ZLR7 823 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 FBXO25Q8TCJ0 367 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 CCDC114Q96M63 670 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 DDX23Q9BUQ8 820 aaKnown RBP4.03□□□□□ -1.76
BRCA2-206ENST00000544455 MTFR1LQ9H019 292 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 CXCL16Q9H2A7 254 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 SEMA4AQ9H3S1 761 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 AZI2Q9H6S1 392 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 EFCC1Q9HA90 598 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 MYO1CO00159 1063 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 MAP3K6O95382 1288 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 RARAP10276 462 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 MAPK4P31152 587 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 GTF2H1P32780 548 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 CHKAP35790 457 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 CDH8P55286 799 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 TFAMQ00059 246 aaKnown RBP4.03□□□□□ -1.76
BRCA2-206ENST00000544455 LRRC14Q15048 493 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 MMS22LQ6ZRQ5 1243 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.03□□□□□ -1.76
BRCA2-206ENST00000544455 NEK9Q8TD19 979 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 ATP6V0A1Q93050 837 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 IFT74Q96LB3 600 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 FHDC1Q9C0D6 1143 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-206ENST00000544455 MLXIPLQ9NP71 852 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 GPRC5DQ9NZD1 345 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 NXF1Q9UBU9 619 aaKnown RBP4.03□□□□□ -1.76
BRCA2-206ENST00000544455 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-206ENST00000544455 GOLGA8KD6RF30 607 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 CAND2O75155 1236 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 DYNLT1P63172 113 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 BRDTQ58F21 947 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-206ENST00000544455 SEL1L2Q5TEA6 688 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 ZNF572Q7Z3I7 529 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-206ENST00000544455 RASGEF1CQ8N431 466 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 CCDC33Q8N5R6 958 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 MGARPQ8TDB4 240 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 ACTRT1Q8TDG2 376 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 EPS8L3Q8TE67 593 aaKnown RBP4.03□□□□□ -1.76
BRCA2-206ENST00000544455 SH3GL2Q99962 352 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 ISCUQ9H1K1 167 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 KCND2Q9NZV8 630 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 SUCLA2Q9P2R7 463 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-206ENST00000544455 CTNNAL1Q9UBT7 734 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 HMGXB4Q9UGU5 601 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 TBK1Q9UHD2 729 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 PCDHB4Q9Y5E5 795 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 OPA1O60313 960 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 ZSCAN5DPP0CG00 497 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 NR1D1P20393 614 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 IFFO1Q0D2I5 559 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 RAB6CQ53S08 254 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 FKBP1CQ5VVH2 108 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 FOXR2Q6PJQ5 311 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 SYCE1Q8N0S2 351 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 GOLGA5Q8TBA6 731 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 SLC7A3Q8WY07 619 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 DDX1Q92499 740 aaKnown RBP4.03□□□□□ -1.76
BRCA2-206ENST00000544455 PBKQ96KB5 322 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 RAB6CQ9H0N0 254 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 MINDY3Q9H8M7 445 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 MED4Q9NPJ6 270 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 TTC7AQ9ULT0 858 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-206ENST00000544455 R3HDM2Q9Y2K5 976 aaKnown RBP4.03□□□□□ -1.76
BRCA2-206ENST00000544455 DAAM1Q9Y4D1 1078 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 MYL6P60660 151 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 PRELID2Q8N945 189 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 SHC3Q92529 594 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 KIFAP3Q92845 792 aa4.03□□□□□ -1.76
BRCA2-206ENST00000544455 DCPSQ96C86 337 aaKnown RBP4.03□□□□□ -1.76
BRCA2-206ENST00000544455 ZSWIM1Q9BR11 485 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms