RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 PIGRP01833 764 aa15.24■□□□□ 0.03
VAMP1-208ENST00000544432 ADH1AP07327 375 aa15.24■□□□□ 0.03
VAMP1-208ENST00000544432 KCNE1P15382 129 aa15.24■□□□□ 0.03
VAMP1-208ENST00000544432 EPCAMP16422 314 aa15.24■□□□□ 0.03
VAMP1-208ENST00000544432 CACNB1Q02641 598 aaPredicted RBP15.24■□□□□ 0.03
VAMP1-208ENST00000544432 CEBPZQ03701 1054 aaKnown RBP15.24■□□□□ 0.03
VAMP1-208ENST00000544432 MCL1Q07820 350 aa15.24■□□□□ 0.03
VAMP1-208ENST00000544432 ELAVL2Q12926 359 aaKnown RBP15.24■□□□□ 0.03
VAMP1-208ENST00000544432 DHX8Q14562 1220 aaKnown RBP15.24■□□□□ 0.03
VAMP1-208ENST00000544432 SPECC1Q5M775 1068 aa15.24■□□□□ 0.03
VAMP1-208ENST00000544432 RRAGBQ5VZM2 374 aa15.24■□□□□ 0.03
VAMP1-208ENST00000544432 KIAA1841Q6NSI8 718 aa15.24■□□□□ 0.03
VAMP1-208ENST00000544432 MYCT1Q8N699 235 aa15.24■□□□□ 0.03
VAMP1-208ENST00000544432 LINC00301Q8NCQ3 95 aa15.24■□□□□ 0.03
VAMP1-208ENST00000544432 FBXL18Q96ME1 805 aa15.24■□□□□ 0.03
VAMP1-208ENST00000544432 UROC1Q96N76 676 aa15.24■□□□□ 0.03
VAMP1-208ENST00000544432 ZNF396Q96N95 335 aaPredicted RBP15.24■□□□□ 0.03
VAMP1-208ENST00000544432 ST6GALNAC4Q9H4F1 302 aa15.24■□□□□ 0.03
VAMP1-208ENST00000544432 SLC38A7Q9NVC3 462 aa15.24■□□□□ 0.03
VAMP1-208ENST00000544432 DPP7Q9UHL4 492 aa15.24■□□□□ 0.03
VAMP1-208ENST00000544432 CASTOR2A6NHX0 329 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 TEX28O15482 410 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 CLDN3O15551 220 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 TRAK2O60296 914 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 GPR37L1O60883 481 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 PPP6R2O75170 966 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 TBCAO75347 108 aaKnown RBP15.23■□□□□ 0.03
VAMP1-208ENST00000544432 KRT18P05783 430 aaKnown RBP15.23■□□□□ 0.03
VAMP1-208ENST00000544432 HSP90AA1P07900 732 aaKnown RBP15.23■□□□□ 0.03
VAMP1-208ENST00000544432 MTHFRP42898 656 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 GTF2BQ00403 316 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 CREMQ03060 361 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 NOLC1Q14978 699 aaKnown RBP eCLIP15.23■□□□□ 0.03
VAMP1-208ENST00000544432 DCLRE1AQ6PJP8 1040 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 CCDC73Q6ZRK6 1079 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 ZBTB33Q86T24 672 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 CEP120Q8N960 986 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 HDAC7Q8WUI4 952 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 DDX27Q96GQ7 796 aaKnown RBP15.23■□□□□ 0.03
VAMP1-208ENST00000544432 ZBTB45Q96K62 511 aaPredicted RBP15.23■□□□□ 0.03
VAMP1-208ENST00000544432 SNX27Q96L92 541 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 RIPOR3Q96MK2 946 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 FIZ1Q96SL8 496 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 PAAF1Q9BRP4 392 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 RHOBTB2Q9BYZ6 727 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 CNTN3Q9P232 1028 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 TBX20Q9UMR3 447 aa15.23■□□□□ 0.03
VAMP1-208ENST00000544432 C2CD2LO14523 706 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 DCXO43602 365 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 KIF4AO95239 1232 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 PAPLNO95428 1278 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 YEATS4O95619 227 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 ZSCAN22P10073 491 aaPredicted RBP15.22■□□□□ 0.03
VAMP1-208ENST00000544432 STK38Q15208 465 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 KYAT1Q16773 422 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 HERC4Q5GLZ8 1057 aaPredicted RBP15.22■□□□□ 0.03
VAMP1-208ENST00000544432 ATL3Q6DD88 541 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 PDXDC1Q6P996 788 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 ELMSAN1Q6PJG2 1045 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 CYP26C1Q6V0L0 522 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 SV2BQ7L1I2 683 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 RNF135Q8IUD6 432 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 CMASQ8NFW8 434 aaPredicted RBP15.22■□□□□ 0.03
VAMP1-208ENST00000544432 TTPALQ9BTX7 342 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 SFXN1Q9H9B4 322 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 PLEKHA5Q9HAU0 1116 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 CACNG4Q9UBN1 327 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.22■□□□□ 0.03
VAMP1-208ENST00000544432 MYH11P35749 1972 aa15.22■□□□□ 0.03
VAMP1-208ENST00000544432 K7ENM7 598 aa15.21■□□□□ 0.03
VAMP1-208ENST00000544432 SPTLC2O15270 562 aa15.21■□□□□ 0.03
VAMP1-208ENST00000544432 GLUD1P00367 558 aa15.21■□□□□ 0.03
VAMP1-208ENST00000544432 RPL9P32969 192 aaKnown RBP15.21■□□□□ 0.03
VAMP1-208ENST00000544432 OSTNP61366 133 aa15.21■□□□□ 0.03
VAMP1-208ENST00000544432 UPP1Q16831 310 aa15.21■□□□□ 0.03
VAMP1-208ENST00000544432 SLC10A6Q3KNW5 377 aa15.21■□□□□ 0.03
VAMP1-208ENST00000544432 ATAT1Q5SQI0 421 aa15.21■□□□□ 0.03
VAMP1-208ENST00000544432 RARS2Q5T160 578 aaKnown RBP15.21■□□□□ 0.03
VAMP1-208ENST00000544432 C15orf39Q6ZRI6 1047 aa15.21■□□□□ 0.03
VAMP1-208ENST00000544432 GPR149Q86SP6 731 aa15.21■□□□□ 0.03
VAMP1-208ENST00000544432 RIN2Q8WYP3 895 aaPredicted RBP15.21■□□□□ 0.03
VAMP1-208ENST00000544432 PIK3R5Q8WYR1 880 aa15.21■□□□□ 0.03
VAMP1-208ENST00000544432 RABGGTAQ92696 567 aa15.21■□□□□ 0.03
VAMP1-208ENST00000544432 BICD1Q96G01 975 aa15.21■□□□□ 0.03
VAMP1-208ENST00000544432 ZMAT2Q96NC0 199 aaKnown RBP15.21■□□□□ 0.03
VAMP1-208ENST00000544432 TSPAN18Q96SJ8 248 aa15.21■□□□□ 0.03
VAMP1-208ENST00000544432 APOL5Q9BWW9 433 aa15.21■□□□□ 0.03
VAMP1-208ENST00000544432 PLEKHA4Q9H4M7 779 aa15.21■□□□□ 0.03
VAMP1-208ENST00000544432 ANKFY1Q9P2R3 1169 aa15.21■□□□□ 0.03
VAMP1-208ENST00000544432 SEL1LQ9UBV2 794 aa15.21■□□□□ 0.03
VAMP1-208ENST00000544432 MYMKA6NI61 221 aa15.2■□□□□ 0.02
VAMP1-208ENST00000544432 MEFVO15553 781 aaPredicted RBP15.2■□□□□ 0.02
VAMP1-208ENST00000544432 TRAPPC3O43617 180 aa15.2■□□□□ 0.02
VAMP1-208ENST00000544432 B3GAT3O94766 335 aa15.2■□□□□ 0.02
VAMP1-208ENST00000544432 F13A1P00488 732 aa15.2■□□□□ 0.02
VAMP1-208ENST00000544432 CLTAP09496 248 aa15.2■□□□□ 0.02
VAMP1-208ENST00000544432 GAP43P17677 238 aa15.2■□□□□ 0.02
VAMP1-208ENST00000544432 FGFR3P22607 806 aa15.2■□□□□ 0.02
VAMP1-208ENST00000544432 LIG4P49917 911 aa15.2■□□□□ 0.02
VAMP1-208ENST00000544432 CLCNKBP51801 687 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms