RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 PPM1LQ5SGD2 360 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 AXDND1Q5T1B0 1012 aaPredicted RBP10.54□□□□□ -0.72
C2CD3-220ENST00000544293 PPP4R3AQ6IN85 833 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 ELMSAN1Q6PJG2 1045 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 TPRG1Q6ZUI0 275 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 MTSS1LQ765P7 747 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 OXER1Q8TDS5 423 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 TCP11Q8WWU5 503 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 MCRS1Q96EZ8 462 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 FAM20AQ96MK3 541 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 JAKMIP1Q96N16 626 aaKnown RBP10.54□□□□□ -0.72
C2CD3-220ENST00000544293 NELL2Q99435 816 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 LARP6Q9BRS8 491 aaKnown RBP10.54□□□□□ -0.72
C2CD3-220ENST00000544293 TTPALQ9BTX7 342 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 PHF20Q9BVI0 1012 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 NFKBIZQ9BYH8 718 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 GJB4Q9NTQ9 266 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 RALYQ9UKM9 306 aaKnown RBP10.54□□□□□ -0.72
C2CD3-220ENST00000544293 KCNH3Q9ULD8 1083 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 KCNJ14Q9UNX9 436 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 USP20Q9Y2K6 914 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.54□□□□□ -0.72
C2CD3-220ENST00000544293 FANCMQ8IYD8 2048 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 DOCK6Q96HP0 2047 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 HRO43593 1189 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 NR1I2O75469 434 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 ECI2O75521 394 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 ERLIN2O94905 339 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 SDHBP21912 280 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 FGFR3P22607 806 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 OR1D2P34982 312 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 CCR2P41597 374 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 MAGEA9P43362 315 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 AKAP17AQ02040 695 aaKnown RBP10.53□□□□□ -0.72
C2CD3-220ENST00000544293 CYP4A11Q02928 519 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 ADCY1Q08828 1119 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 DMWDQ09019 674 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 SPEM2Q0P670 501 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 TUSC3Q13454 348 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 PSMD5Q16401 504 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 LPAL2Q16609 132 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 UVSSAQ2YD98 709 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 PRSS36Q5K4E3 855 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 CEP57Q86XR8 500 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 EXOC8Q8IYI6 725 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 SLC7A14Q8TBB6 771 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 ING5Q8WYH8 240 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 MTRQ99707 1265 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 C22orf23Q9BZE7 217 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 FZD8Q9H461 694 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 PARP2Q9UGN5 583 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 MAP1BP46821 2468 aaKnown RBP10.53□□□□□ -0.72
C2CD3-220ENST00000544293 CHD8Q9HCK8 2581 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 F5P12259 2224 aa10.53□□□□□ -0.72
C2CD3-220ENST00000544293 MYH9P35579 1960 aaKnown RBP10.52□□□□□ -0.72
C2CD3-220ENST00000544293 FAM205CA6NFA0 338 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 SLC30A4O14863 429 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 GDF9O60383 454 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 MOSPD3O75425 235 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 LYPLA2O95372 231 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 RHOP08100 348 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 PFKPQ01813 784 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 MXD4Q14582 209 aaPredicted RBP10.52□□□□□ -0.73
C2CD3-220ENST00000544293 ST3GAL2Q16842 350 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 PABPC1LQ4VXU2 614 aaKnown RBP10.52□□□□□ -0.73
C2CD3-220ENST00000544293 SLC27A1Q6PCB7 646 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 BLOC1S2Q6QNY1 142 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 ZNF852Q6ZMS4 543 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 OTUD6AQ7L8S5 288 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 MAP4K3Q8IVH8 894 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 TCEAL4Q96EI5 215 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 ZSWIM3Q96MP5 696 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 CHRDQ9H2X0 955 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 ZSWIM4Q9H7M6 989 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 GPRC5CQ9NQ84 441 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 AVENQ9NQS1 362 aaPredicted RBP10.52□□□□□ -0.73
C2CD3-220ENST00000544293 C2orf42Q9NWW7 574 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 SNTG2Q9NY99 539 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 MTRRQ9UBK8 725 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 CDV3Q9UKY7 258 aaKnown RBP10.52□□□□□ -0.73
C2CD3-220ENST00000544293 USP18Q9UMW8 372 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 POLIQ9UNA4 740 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 NCANO14594 1321 aa10.52□□□□□ -0.73
C2CD3-220ENST00000544293 SF3B1O75533 1304 aaKnown RBP eCLIP10.52□□□□□ -0.73
C2CD3-220ENST00000544293 USP24Q9UPU5 2620 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 WNT7AO00755 349 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 TM4SF5O14894 197 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 TBX3O15119 743 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 DKC1O60832 514 aaKnown RBP eCLIP10.51□□□□□ -0.73
C2CD3-220ENST00000544293 CHRNB1P11230 501 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 CEBPBP17676 345 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 RARRES1P49788 294 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 FGD1P98174 961 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 CREMQ03060 361 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 SSRP1Q08945 709 aaKnown RBP10.51□□□□□ -0.73
C2CD3-220ENST00000544293 SRSF5Q13243 272 aaKnown RBP10.51□□□□□ -0.73
C2CD3-220ENST00000544293 PPM1JQ5JR12 505 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 FAM78AQ5JUQ0 283 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 LIN9Q5TKA1 542 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 KRT25Q7Z3Z0 450 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms