RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 GIT1Q9Y2X7 761 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 R3HCC1Q9Y3T6 440 aaKnown RBP12.91□□□□□ -0.34
DDB1-223ENST00000543658 HES2Q9Y543 173 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 PCDHB7Q9Y5E2 793 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 PTPRSQ13332 1948 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 C9IYK1 514 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 ZNF623O75123 536 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 CLSTN1O94985 981 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 TNNC2P02585 160 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 TNNI1P19237 187 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 AKAP5P24588 427 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 MARSP56192 900 aaKnown RBP12.9□□□□□ -0.34
DDB1-223ENST00000543658 PSMD6Q15008 389 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 ZBTB41Q5SVQ8 909 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 CRELD2Q6UXH1 353 aaPredicted RBP12.9□□□□□ -0.34
DDB1-223ENST00000543658 NPAS4Q8IUM7 802 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 TMEM192Q8IY95 271 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 SMG8Q8ND04 991 aaKnown RBP12.9□□□□□ -0.34
DDB1-223ENST00000543658 ZSWIM2Q8NEG5 633 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 URGCPQ8TCY9 931 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 TMC2Q8TDI7 906 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 CACTINQ8WUQ7 758 aaKnown RBP12.9□□□□□ -0.34
DDB1-223ENST00000543658 LINC01599Q8WXQ3 324 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 CCDC127Q96BQ5 260 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 KIF12Q96FN5 646 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 ANKRD36BP1Q96IX9 119 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 SNX27Q96L92 541 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 CGRRF1Q99675 332 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 TUBGCP2Q9BSJ2 902 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 ASB7Q9H672 318 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 ELAC1Q9H777 363 aaKnown RBP12.9□□□□□ -0.34
DDB1-223ENST00000543658 MMRN2Q9H8L6 949 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 PLEKHA5Q9HAU0 1116 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 TMEM161AQ9NX61 479 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 TAB2Q9NYJ8 693 aa12.9□□□□□ -0.34
DDB1-223ENST00000543658 ENPP3O14638 875 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 CBFA2T2O43439 604 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 FAM189A1O60320 539 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 N4BP1O75113 896 aaKnown RBP12.89□□□□□ -0.35
DDB1-223ENST00000543658 ZNF18P17022 549 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 MLH1P40692 756 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 ENPEPQ07075 957 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 CETN1Q12798 172 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 GSE1Q14687 1217 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 TMEM132DQ14C87 1099 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 ENOX2Q16206 610 aaKnown RBP12.89□□□□□ -0.35
DDB1-223ENST00000543658 FKBP15Q5T1M5 1219 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 GLB1LQ6UWU2 654 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 OTOP2Q7RTS6 562 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 MRPL10Q7Z7H8 261 aaKnown RBP12.89□□□□□ -0.35
DDB1-223ENST00000543658 NT5DC4Q86YG4 428 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 WDR49Q8IV35 697 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 RSPH1Q8WYR4 309 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 LPPQ93052 612 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 MFSD14AQ96MC6 490 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 PDE11AQ9HCR9 933 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 KLK14Q9P0G3 267 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 INPP5FQ9Y2H2 1132 aa12.89□□□□□ -0.35
DDB1-223ENST00000543658 LACTBL1A8MY62 500 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 PHACTR2O75167 634 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 CAPN15O75808 1086 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 UPP2O95045 317 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 AFPP02771 609 aaKnown RBP12.88□□□□□ -0.35
DDB1-223ENST00000543658 TRIM49P0CI25 452 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 TRIM49CP0CI26 452 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 ATP1A3P13637 1013 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 COPB1P53618 953 aaKnown RBP12.88□□□□□ -0.35
DDB1-223ENST00000543658 AP3M2P53677 418 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 TFAMQ00059 246 aaKnown RBP12.88□□□□□ -0.35
DDB1-223ENST00000543658 FANCCQ00597 558 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 BIRC3Q13489 604 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 KRT31Q15323 416 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 JADE1Q6IE81 842 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 ZNF365Q70YC5 407 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 RTN4RL1Q86UN2 441 aaPredicted RBP12.88□□□□□ -0.35
DDB1-223ENST00000543658 TRIM59Q8IWR1 403 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 BEST2Q8NFU1 509 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 PARD3BQ8TEW8 1205 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 TSPAN18Q96SJ8 248 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 VPS16Q9H269 839 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 SLC38A7Q9NVC3 462 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 CNTN3Q9P232 1028 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 LIMA1Q9UHB6 759 aaKnown RBP12.88□□□□□ -0.35
DDB1-223ENST00000543658 DERAQ9Y315 318 aa12.88□□□□□ -0.35
DDB1-223ENST00000543658 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.88□□□□□ -0.35
DDB1-223ENST00000543658 GBF1Q92538 1859 aa12.87□□□□□ -0.35
DDB1-223ENST00000543658 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.87□□□□□ -0.35
DDB1-223ENST00000543658 TTC26A0AVF1 554 aa12.87□□□□□ -0.35
DDB1-223ENST00000543658 LRRIQ3A6PVS8 624 aaPredicted RBP12.87□□□□□ -0.35
DDB1-223ENST00000543658 THP07101 528 aa12.87□□□□□ -0.35
DDB1-223ENST00000543658 ATF7P17544 494 aaPredicted RBP12.87□□□□□ -0.35
DDB1-223ENST00000543658 MXI1P50539 228 aa12.87□□□□□ -0.35
DDB1-223ENST00000543658 UBASH3AP57075 661 aa12.87□□□□□ -0.35
DDB1-223ENST00000543658 WDR5P61964 334 aaKnown RBP12.87□□□□□ -0.35
DDB1-223ENST00000543658 MYL7Q01449 175 aa12.87□□□□□ -0.35
DDB1-223ENST00000543658 RNASELQ05823 741 aaKnown RBP12.87□□□□□ -0.35
DDB1-223ENST00000543658 KCNH2Q12809 1159 aa12.87□□□□□ -0.35
DDB1-223ENST00000543658 DUOXA2Q1HG44 320 aa12.87□□□□□ -0.35
DDB1-223ENST00000543658 TCTN1Q2MV58 587 aa12.87□□□□□ -0.35
DDB1-223ENST00000543658 SLC10A6Q3KNW5 377 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms