RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 N4BP2L2Q92802 583 aaPredicted RBP14.68□□□□□ -0.06
VPS33A-208ENST00000543633 UPF1Q92900 1129 aaKnown RBP eCLIP14.68□□□□□ -0.06
VPS33A-208ENST00000543633 ABCF3Q9NUQ8 709 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 EXOC7Q9UPT5 735 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 TMX2Q9Y320 296 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 SMCHD1A6NHR9 2005 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 A0A1W2PRG0 241 aa14.67□□□□□ -0.06
VPS33A-208ENST00000543633 TP73O15350 636 aa14.67□□□□□ -0.06
VPS33A-208ENST00000543633 ARP10275 920 aa14.67□□□□□ -0.06
VPS33A-208ENST00000543633 TAL1P17542 331 aaPredicted RBP14.67□□□□□ -0.06
VPS33A-208ENST00000543633 SLCO1A2P46721 670 aa14.67□□□□□ -0.06
VPS33A-208ENST00000543633 IFNAR2P48551 515 aa14.67□□□□□ -0.06
VPS33A-208ENST00000543633 NCKAP1LP55160 1127 aa14.67□□□□□ -0.06
VPS33A-208ENST00000543633 SLC8A3P57103 927 aa14.67□□□□□ -0.06
VPS33A-208ENST00000543633 PPARDQ03181 441 aa14.67□□□□□ -0.06
VPS33A-208ENST00000543633 BNIP1Q12981 228 aa14.67□□□□□ -0.06
VPS33A-208ENST00000543633 ACVR2BQ13705 512 aa14.67□□□□□ -0.06
VPS33A-208ENST00000543633 CRYMQ14894 314 aa14.67□□□□□ -0.06
VPS33A-208ENST00000543633 KRT39Q6A163 491 aa14.67□□□□□ -0.06
VPS33A-208ENST00000543633 CNKSR1Q969H4 720 aa14.67□□□□□ -0.06
VPS33A-208ENST00000543633 CBWD1Q9BRT8 395 aa14.67□□□□□ -0.06
VPS33A-208ENST00000543633 TRAIPQ9BWF2 469 aa14.67□□□□□ -0.06
VPS33A-208ENST00000543633 TMEM8AQ9HCN3 771 aa14.67□□□□□ -0.06
VPS33A-208ENST00000543633 UBOX5O94941 541 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 CYP11B1P15538 503 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 CLEC16AQ2KHT3 1053 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 UBAP2Q5T6F2 1119 aaKnown RBP14.66□□□□□ -0.06
VPS33A-208ENST00000543633 RNF43Q68DV7 783 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 SPATA21Q7Z572 469 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 USP37Q86T82 979 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 PLEKHO2Q8TD55 490 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 NT5C1BQ96P26 610 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 MTFR1LQ9H019 292 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 CCDC113Q9H0I3 377 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 RXFP1Q9HBX9 757 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 ASIC3Q9UHC3 531 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 BAIAP2L1Q9UHR4 511 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 PTPN22Q9Y2R2 807 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 CYP26A1O43174 497 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 ZC3H11AO75152 810 aaKnown RBP eCLIP14.66□□□□□ -0.06
VPS33A-208ENST00000543633 ABHD2P08910 425 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 KCNA3P22001 575 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 IVDP26440 423 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 RARRES1P49788 294 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 HSD17B4P51659 736 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 COPS2P61201 443 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 LONRF1Q17RB8 773 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 PPP1R21Q6ZMI0 780 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 ARHGEF18Q6ZSZ5 1173 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 HAUS6Q7Z4H7 955 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 CCDC25Q86WR0 208 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 ZNF677Q86XU0 584 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 KIAA0825Q8IV33 1275 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 PPM1KQ8N3J5 372 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 HELQQ8TDG4 1101 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 DDX1Q92499 740 aaKnown RBP14.66□□□□□ -0.06
VPS33A-208ENST00000543633 RSRC1Q96IZ7 334 aaKnown RBP14.66□□□□□ -0.06
VPS33A-208ENST00000543633 MAGEB18Q96M61 343 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 PCIF1Q9H4Z3 704 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 PRKAG3Q9UGI9 489 aa14.66□□□□□ -0.06
VPS33A-208ENST00000543633 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.66□□□□□ -0.06
VPS33A-208ENST00000543633 PSME4Q14997 1843 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 TCP11X1B4DZS4 312 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 CLDN3O15551 220 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 ATMINO43313 823 aaPredicted RBP14.65□□□□□ -0.06
VPS33A-208ENST00000543633 CDH16O75309 829 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 WFS1O76024 890 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 ZBTB7AO95365 584 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 DLATP10515 647 aaKnown RBP14.65□□□□□ -0.06
VPS33A-208ENST00000543633 ATF2P15336 505 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 RBM5P52756 815 aaKnown RBP eCLIP14.65□□□□□ -0.06
VPS33A-208ENST00000543633 JAG1P78504 1218 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 GHRHRQ02643 423 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 STRN3Q13033 797 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 NR1H3Q13133 447 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 STAT4Q14765 748 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 SLC47A2Q86VL8 602 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 LARGE2Q8N3Y3 721 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 DHX38Q92620 1227 aaKnown RBP14.65□□□□□ -0.06
VPS33A-208ENST00000543633 KAT5Q92993 513 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 DDX23Q9BUQ8 820 aaKnown RBP14.65□□□□□ -0.06
VPS33A-208ENST00000543633 DCLK3Q9C098 648 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 ECT2Q9H8V3 914 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 BATF3Q9NR55 127 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 FGFR1OP2Q9NVK5 253 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 ADRB2P07550 413 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 KCNJ1P48048 391 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 KCTD19Q17RG1 926 aaPredicted RBP14.65□□□□□ -0.06
VPS33A-208ENST00000543633 FAM133BQ5BKY9 247 aaKnown RBP14.65□□□□□ -0.06
VPS33A-208ENST00000543633 CC2D2BQ6DHV5 1058 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 TBC1D1Q86TI0 1168 aaPredicted RBP14.65□□□□□ -0.06
VPS33A-208ENST00000543633 MAB21L3Q8N8X9 362 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 ATL2Q8NHH9 583 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 UHMK1Q8TAS1 419 aaKnown RBP14.65□□□□□ -0.06
VPS33A-208ENST00000543633 TCP11Q8WWU5 503 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 CCDC77Q9BR77 488 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 ARHGEF3Q9NR81 526 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 NOP53Q9NZM5 478 aaKnown RBP14.65□□□□□ -0.06
VPS33A-208ENST00000543633 AGAP1Q9UPQ3 857 aa14.65□□□□□ -0.06
VPS33A-208ENST00000543633 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms