RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 APTXQ7Z2E3 356 aaKnown RBP6.38□□□□□ -1.39
ABCF1-207ENST00000542772 CBWD2Q8IUF1 395 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 BRSK2Q8IWQ3 736 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 TRIM59Q8IWR1 403 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 HACE1Q8IYU2 909 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 RDH13Q8NBN7 331 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 PLEKHO2Q8TD55 490 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 ZMAT2Q96NC0 199 aaKnown RBP6.38□□□□□ -1.39
ABCF1-207ENST00000542772 CASD1Q96PB1 797 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 FAM213AQ9BRX8 229 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 TRIM6Q9C030 488 aaPredicted RBP6.38□□□□□ -1.39
ABCF1-207ENST00000542772 CXCL16Q9H2A7 254 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 TSPY26PQ9H489 355 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 NXF3Q9H4D5 531 aaKnown RBP6.38□□□□□ -1.39
ABCF1-207ENST00000542772 RPF1Q9H9Y2 349 aaKnown RBP6.38□□□□□ -1.39
ABCF1-207ENST00000542772 RC3H2Q9HBD1 1191 aaKnown RBP6.38□□□□□ -1.39
ABCF1-207ENST00000542772 CXXC1Q9P0U4 656 aaPredicted RBP6.38□□□□□ -1.39
ABCF1-207ENST00000542772 CNTN3Q9P232 1028 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 LIMA1Q9UHB6 759 aaKnown RBP6.38□□□□□ -1.39
ABCF1-207ENST00000542772 CTNND2Q9UQB3 1225 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 FRMD4BQ9Y2L6 1034 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 COQ4Q9Y3A0 265 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 NFE2L3Q9Y4A8 694 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 HES2Q9Y543 173 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.38□□□□□ -1.39
ABCF1-207ENST00000542772 ANK1P16157 1881 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 FNDC1Q4ZHG4 1894 aaPredicted RBP6.38□□□□□ -1.39
ABCF1-207ENST00000542772 PTPRSQ13332 1948 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 CITO14578 2027 aa6.38□□□□□ -1.39
ABCF1-207ENST00000542772 GOLGA8IPA6NC78 632 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 ARL5CA6NH57 179 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 GOLGA8JA6NMD2 632 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 PTGESO14684 152 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 RECQL4O94761 1208 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 GJB5O95377 273 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 CST3P01034 146 aaPredicted RBP6.37□□□□□ -1.39
ABCF1-207ENST00000542772 THP07101 528 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 EEF1GP26641 437 aaKnown RBP6.37□□□□□ -1.39
ABCF1-207ENST00000542772 LRPAP1P30533 357 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 GTF2H1P32780 548 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 MATR3P43243 847 aaKnown RBP eCLIP6.37□□□□□ -1.39
ABCF1-207ENST00000542772 CYP2J2P51589 502 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 VAMP7P51809 220 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 AP3M2P53677 418 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 YARSP54577 528 aaKnown RBP6.37□□□□□ -1.39
ABCF1-207ENST00000542772 OSTNP61366 133 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 DLG4P78352 724 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 DEFB103AP81534 67 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 PPP2R3AQ06190 1150 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 CYP24A1Q07973 514 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 BFSP1Q12934 665 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 UVSSAQ2YD98 709 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 TCP11X2Q5H9J9 407 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 CLLU1OSQ5K130 101 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 C9orf50Q5SZB4 431 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 CEP135Q66GS9 1140 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 WDR49Q8IV35 697 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 FAM114A1Q8IWE2 563 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 FAM186BQ8IYM0 893 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 CXorf38Q8TB03 319 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 SP7Q8TDD2 431 aaPredicted RBP6.37□□□□□ -1.39
ABCF1-207ENST00000542772 CACTINQ8WUQ7 758 aaKnown RBP6.37□□□□□ -1.39
ABCF1-207ENST00000542772 LPPQ93052 612 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 SLC35C1Q96A29 364 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 SAAL1Q96ER3 474 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 EEF2KMTQ96G04 330 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 SNX27Q96L92 541 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 PPP1R10Q96QC0 940 aaKnown RBP6.37□□□□□ -1.39
ABCF1-207ENST00000542772 SLC9A7Q96T83 725 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 GAD1Q99259 594 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 TMEM117Q9H0C3 514 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 RBSNQ9H1K0 784 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 RSAD1Q9HA92 442 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 PDE11AQ9HCR9 933 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 TOPORSQ9NS56 1045 aaPredicted RBP6.37□□□□□ -1.39
ABCF1-207ENST00000542772 INTS13Q9NVM9 706 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 RBAKQ9NYW8 714 aaPredicted RBP6.37□□□□□ -1.39
ABCF1-207ENST00000542772 ANKFY1Q9P2R3 1169 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 PARP2Q9UGN5 583 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 ARMCX3Q9UH62 379 aaPredicted RBP6.37□□□□□ -1.39
ABCF1-207ENST00000542772 C2CD2Q9Y426 696 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 INSL6Q9Y581 213 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 SLC4A7Q9Y6M7 1214 aa6.37□□□□□ -1.39
ABCF1-207ENST00000542772 PDCD11Q14690 1871 aaKnown RBP6.36□□□□□ -1.39
ABCF1-207ENST00000542772 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.36□□□□□ -1.39
ABCF1-207ENST00000542772 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.36□□□□□ -1.39
ABCF1-207ENST00000542772 ANO9A1A5B4 782 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 LRRIQ3A6PVS8 624 aaPredicted RBP6.36□□□□□ -1.39
ABCF1-207ENST00000542772 BECN2A8MW95 431 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 PIRO00625 290 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 P4HA2O15460 535 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 DDHD2O94830 711 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 EFEMP2O95967 443 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 ALDH2P05091 517 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 FAM163BP0C2L3 166 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 LINC00271P0C7V0 271 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 CXCL8P10145 99 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 EPB41P11171 864 aaKnown RBP6.36□□□□□ -1.39
ABCF1-207ENST00000542772 KRT13P13646 458 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 PAX3P23760 479 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms