RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 HASPINQ8TF76 798 aa24.19■■□□□ 1.46
C2CD3-216ENST00000541922 B3GALT6Q96L58 329 aa24.19■■□□□ 1.46
C2CD3-216ENST00000541922 RIPOR3Q96MK2 946 aa24.19■■□□□ 1.46
C2CD3-216ENST00000541922 USP28Q96RU2 1077 aa24.19■■□□□ 1.46
C2CD3-216ENST00000541922 RXFP1Q9HBX9 757 aa24.19■■□□□ 1.46
C2CD3-216ENST00000541922 CDH22Q9UJ99 828 aa24.19■■□□□ 1.46
C2CD3-216ENST00000541922 ABLIM1O14639 778 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 GPR37L1O60883 481 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 TOM1L1O75674 476 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 KIF4AO95239 1232 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 BRD1O95696 1058 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 HSP90AA1P07900 732 aaKnown RBP24.18■■□□□ 1.46
C2CD3-216ENST00000541922 DDIT3P35638 169 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 TXLNAP40222 546 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 NCKAP1LP55160 1127 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 ZPBP2Q6X784 338 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 HAUS6Q7Z4H7 955 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 GPR65Q8IYL9 337 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 RIN2Q8WYP3 895 aaPredicted RBP24.18■■□□□ 1.46
C2CD3-216ENST00000541922 ZBTB45Q96K62 511 aaPredicted RBP24.18■■□□□ 1.46
C2CD3-216ENST00000541922 CLIC6Q96NY7 704 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 ACAP3Q96P50 834 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 PPP1R10Q96QC0 940 aaKnown RBP24.18■■□□□ 1.46
C2CD3-216ENST00000541922 LRFN3Q9BTN0 628 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 ZHX3Q9H4I2 956 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 SFXN1Q9H9B4 322 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 PARVGQ9HBI0 331 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.18■■□□□ 1.46
C2CD3-216ENST00000541922 ANKFY1Q9P2R3 1169 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 MUTYHQ9UIF7 546 aa24.18■■□□□ 1.46
C2CD3-216ENST00000541922 C5orf42Q9H799 3197 aa24.17■■□□□ 1.46
C2CD3-216ENST00000541922 PLXNA3P51805 1871 aa24.17■■□□□ 1.46
C2CD3-216ENST00000541922 FAM86C2PA6NEL3 165 aa24.17■■□□□ 1.46
C2CD3-216ENST00000541922 TBCAO75347 108 aaKnown RBP24.17■■□□□ 1.46
C2CD3-216ENST00000541922 WEE2P0C1S8 567 aa24.17■■□□□ 1.46
C2CD3-216ENST00000541922 NOLC1Q14978 699 aaKnown RBP eCLIP24.17■■□□□ 1.46
C2CD3-216ENST00000541922 SLC39A14Q15043 492 aa24.17■■□□□ 1.46
C2CD3-216ENST00000541922 ATAT1Q5SQI0 421 aa24.17■■□□□ 1.46
C2CD3-216ENST00000541922 KANK3Q6NY19 840 aa24.17■■□□□ 1.46
C2CD3-216ENST00000541922 ELMSAN1Q6PJG2 1045 aa24.17■■□□□ 1.46
C2CD3-216ENST00000541922 TMC5Q6UXY8 1006 aa24.17■■□□□ 1.46
C2CD3-216ENST00000541922 BICD1Q96G01 975 aa24.17■■□□□ 1.46
C2CD3-216ENST00000541922 POMKQ9H5K3 350 aa24.17■■□□□ 1.46
C2CD3-216ENST00000541922 C11orf16Q9NQ32 467 aa24.17■■□□□ 1.46
C2CD3-216ENST00000541922 DPP7Q9UHL4 492 aa24.17■■□□□ 1.46
C2CD3-216ENST00000541922 MYH15Q9Y2K3 1946 aa24.17■■□□□ 1.46
C2CD3-216ENST00000541922 SMIM28A0A1B0GU29 152 aa24.16■■□□□ 1.46
C2CD3-216ENST00000541922 CLDN3O15551 220 aa24.16■■□□□ 1.46
C2CD3-216ENST00000541922 GLUD1P00367 558 aa24.16■■□□□ 1.46
C2CD3-216ENST00000541922 COL9A1P20849 921 aa24.16■■□□□ 1.46
C2CD3-216ENST00000541922 SCP2P22307 547 aa24.16■■□□□ 1.46
C2CD3-216ENST00000541922 MATR3P43243 847 aaKnown RBP eCLIP24.16■■□□□ 1.46
C2CD3-216ENST00000541922 ZNF131P52739 623 aa24.16■■□□□ 1.46
C2CD3-216ENST00000541922 CREMQ03060 361 aa24.16■■□□□ 1.46
C2CD3-216ENST00000541922 ELAVL2Q12926 359 aaKnown RBP24.16■■□□□ 1.46
C2CD3-216ENST00000541922 HERC4Q5GLZ8 1057 aaPredicted RBP24.16■■□□□ 1.46
C2CD3-216ENST00000541922 FAM171A1Q5VUB5 890 aa24.16■■□□□ 1.46
C2CD3-216ENST00000541922 ALKAL1Q6UXT8 129 aa24.16■■□□□ 1.46
C2CD3-216ENST00000541922 UROC1Q96N76 676 aa24.16■■□□□ 1.46
C2CD3-216ENST00000541922 MAN1C1Q9NR34 630 aa24.16■■□□□ 1.46
C2CD3-216ENST00000541922 FNIP2Q9P278 1114 aa24.16■■□□□ 1.46
C2CD3-216ENST00000541922 STK17AQ9UEE5 414 aa24.16■■□□□ 1.46
C2CD3-216ENST00000541922 NR2E1Q9Y466 385 aa24.16■■□□□ 1.46
C2CD3-216ENST00000541922 MORC2Q9Y6X9 1032 aaPredicted RBP24.16■■□□□ 1.46
C2CD3-216ENST00000541922 K7ENM7 598 aa24.15■■□□□ 1.46
C2CD3-216ENST00000541922 TRAK2O60296 914 aa24.15■■□□□ 1.46
C2CD3-216ENST00000541922 SP100P23497 879 aaPredicted RBP24.15■■□□□ 1.46
C2CD3-216ENST00000541922 XKR4Q5GH76 650 aa24.15■■□□□ 1.46
C2CD3-216ENST00000541922 RRAGBQ5VZM2 374 aa24.15■■□□□ 1.46
C2CD3-216ENST00000541922 CEP57Q86XR8 500 aa24.15■■□□□ 1.46
C2CD3-216ENST00000541922 KRI1Q8N9T8 703 aaKnown RBP24.15■■□□□ 1.46
C2CD3-216ENST00000541922 KCNN1Q92952 543 aa24.15■■□□□ 1.46
C2CD3-216ENST00000541922 SNX27Q96L92 541 aa24.15■■□□□ 1.46
C2CD3-216ENST00000541922 TTPALQ9BTX7 342 aa24.15■■□□□ 1.46
C2CD3-216ENST00000541922 TSHZ2Q9NRE2 1034 aa24.15■■□□□ 1.46
C2CD3-216ENST00000541922 SLC38A7Q9NVC3 462 aa24.15■■□□□ 1.46
C2CD3-216ENST00000541922 MTCL1Q9Y4B5 1905 aaKnown RBP24.14■■□□□ 1.46
C2CD3-216ENST00000541922 TMEM189-UBE2V1I3L0A0 370 aa24.14■■□□□ 1.45
C2CD3-216ENST00000541922 B3GAT3O94766 335 aa24.14■■□□□ 1.45
C2CD3-216ENST00000541922 NASPP49321 788 aaPredicted RBP24.14■■□□□ 1.45
C2CD3-216ENST00000541922 CLCNKBP51801 687 aa24.14■■□□□ 1.45
C2CD3-216ENST00000541922 STK38Q15208 465 aa24.14■■□□□ 1.45
C2CD3-216ENST00000541922 RTP2Q5QGT7 225 aa24.14■■□□□ 1.45
C2CD3-216ENST00000541922 DCLRE1AQ6PJP8 1040 aa24.14■■□□□ 1.45
C2CD3-216ENST00000541922 PRSS55Q6UWB4 352 aaPredicted RBP24.14■■□□□ 1.45
C2CD3-216ENST00000541922 GPR149Q86SP6 731 aa24.14■■□□□ 1.45
C2CD3-216ENST00000541922 PALB2Q86YC2 1186 aa24.14■■□□□ 1.45
C2CD3-216ENST00000541922 GLYCTKQ8IVS8 523 aa24.14■■□□□ 1.45
C2CD3-216ENST00000541922 GOLGA2P5Q9HBQ8 144 aa24.14■■□□□ 1.45
C2CD3-216ENST00000541922 TBX20Q9UMR3 447 aa24.14■■□□□ 1.45
C2CD3-216ENST00000541922 PDIA4P13667 645 aaKnown RBP24.13■■□□□ 1.45
C2CD3-216ENST00000541922 RPL17P18621 184 aaKnown RBP24.13■■□□□ 1.45
C2CD3-216ENST00000541922 LIG4P49917 911 aa24.13■■□□□ 1.45
C2CD3-216ENST00000541922 MCL1Q07820 350 aa24.13■■□□□ 1.45
C2CD3-216ENST00000541922 UPP1Q16831 310 aa24.13■■□□□ 1.45
C2CD3-216ENST00000541922 DDX27Q96GQ7 796 aaKnown RBP24.13■■□□□ 1.45
C2CD3-216ENST00000541922 ZNF396Q96N95 335 aaPredicted RBP24.13■■□□□ 1.45
C2CD3-216ENST00000541922 ZMAT2Q96NC0 199 aaKnown RBP24.13■■□□□ 1.45
C2CD3-216ENST00000541922 VWA8A3KMH1 1905 aa24.12■■□□□ 1.45
C2CD3-216ENST00000541922 HNRNPDLO14979 420 aaKnown RBP24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms