RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 MRPL1Q9BYD6 325 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 POLD4Q9HCU8 107 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 IQSEC2Q5JU85 1478 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 SUPT3HO75486 399 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 CCDC159P0C7I6 412 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 RCN1Q15293 331 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 ADCK1Q86TW2 530 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 PACS2Q86VP3 889 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 TUFT1Q9NNX1 390 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 MADDQ8WXG6 1647 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 SORBS3O60504 671 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 P4HBP07237 508 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 TRIM49P0CI25 452 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 TRIM49CP0CI26 452 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 GNAT1P11488 350 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 KRT76Q01546 638 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 ANKMY2Q8IV38 441 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 MSL3Q8N5Y2 521 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 KCTD17Q8N5Z5 321 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 AIPL1Q9NZN9 384 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 ABCC3O15438 1527 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 UNC13BO14795 1591 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 HOXA13P31271 388 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 STK4Q13043 487 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 ZBTB41Q5SVQ8 909 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 ZNF555Q8NEP9 628 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 FRMD8Q9BZ67 464 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 ALG13Q9NP73 1137 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 TMEM260Q9NX78 707 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 TEKT2Q9UIF3 430 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 HPSEQ9Y251 543 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 SFNP31947 248 aa15.77■□□□□ 0.12
SMARCA4-207ENST00000541122 COILP38432 576 aaPredicted RBP15.77■□□□□ 0.12
SMARCA4-207ENST00000541122 EIF3EP60228 445 aaKnown RBP15.77■□□□□ 0.12
SMARCA4-207ENST00000541122 ERFEQ4G0M1 354 aa15.77■□□□□ 0.12
SMARCA4-207ENST00000541122 FAM47CQ5HY64 1035 aa15.77■□□□□ 0.12
SMARCA4-207ENST00000541122 MDM1Q8TC05 714 aa15.77■□□□□ 0.12
SMARCA4-207ENST00000541122 ACTRT1Q8TDG2 376 aa15.77■□□□□ 0.12
SMARCA4-207ENST00000541122 DACH2Q96NX9 599 aa15.77■□□□□ 0.12
SMARCA4-207ENST00000541122 SNX2O60749 519 aa15.77■□□□□ 0.12
SMARCA4-207ENST00000541122 FMO5P49326 533 aa15.77■□□□□ 0.12
SMARCA4-207ENST00000541122 MAPK7Q13164 816 aa15.77■□□□□ 0.12
SMARCA4-207ENST00000541122 DDX17Q92841 729 aaKnown RBP15.77■□□□□ 0.12
SMARCA4-207ENST00000541122 KIF17Q9P2E2 1029 aa15.77■□□□□ 0.12
SMARCA4-207ENST00000541122 AKT3Q9Y243 479 aa15.77■□□□□ 0.12
SMARCA4-207ENST00000541122 LZTS1Q9Y250 596 aa15.77■□□□□ 0.12
SMARCA4-207ENST00000541122 PDE5AO76074 875 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 TDP2O95551 362 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 KRT75O95678 551 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 CYP2D6P10635 497 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 LTKP29376 864 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 NPEPPSP55786 919 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 TNFAIP2Q03169 654 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 LRRC36Q1X8D7 754 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 NAIF1Q69YI7 327 aaPredicted RBP15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 PDXDC2PQ6P474 469 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 TERB1Q8NA31 727 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 MKNK1Q9BUB5 465 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 ROBO2Q9HCK4 1378 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 SRRM3A6NNA2 597 aaPredicted RBP15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 HNRNPRO43390 633 aaKnown RBP15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 SNRPAP09012 282 aaKnown RBP15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 GFAPP14136 432 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 ITGA8P53708 1063 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 DEFA1P59665 94 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 DEFA3P59666 94 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 WASHC2DQ5SRD0 308 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 SRBD1Q8N5C6 995 aaKnown RBP15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 EXT2Q93063 718 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 PAWRQ96IZ0 340 aaKnown RBP15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 FAM213AQ9BRX8 229 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 APOL6Q9BWW8 343 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 AP4S1Q9Y587 144 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 CDC42BPGQ6DT37 1551 aa15.77■□□□□ 0.11
SMARCA4-207ENST00000541122 UTYO14607 1347 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 AP5Z1O43299 807 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 CDH2P19022 906 aaPredicted RBP15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 SKOR1P84550 965 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 PTK7Q13308 1070 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 DOK7Q18PE1 504 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 PHTF1Q9UMS5 762 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 TYW5A2RUC4 315 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 GPD1LQ8N335 351 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 DDHD1Q8NEL9 900 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 SH3RF3Q8TEJ3 882 aaPredicted RBP15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 CELF4Q9BZC1 486 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 DTNAQ9Y4J8 743 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 CSADQ9Y600 493 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 GLI2P10070 1586 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 CLTCL1P53675 1640 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 GOLGA8RI6L899 631 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 SLC16A4O15374 487 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 GDF11O95390 407 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 RARGP13631 454 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 YTHDF3Q7Z739 585 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 TPCN2Q8NHX9 752 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 RXFP1Q9HBX9 757 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 CDY2AQ9Y6F7 541 aa15.76■□□□□ 0.11
SMARCA4-207ENST00000541122 CDY1Q9Y6F8 540 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms