RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 URODP06132 367 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 EIF4BP23588 611 aaKnown RBP9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 CYP3A7P24462 503 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 CXCL12P48061 93 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 SLC11A1P49279 550 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 NOVA1P51513 510 aaKnown RBP9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 HMGN5P82970 282 aaKnown RBP9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 RNASELQ05823 741 aaKnown RBP9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 CUL4AQ13619 759 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 SF3A2Q15428 464 aaKnown RBP9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 PRR16Q569H4 304 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 NOMO2Q5JPE7 1267 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 GLB1LQ6UWU2 654 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 PIK3AP1Q6ZUJ8 805 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 KRT25Q7Z3Z0 450 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 LONP2Q86WA8 852 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 FAM160A2Q8N612 972 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 ST13P5Q8NFI4 369 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 FBXO18Q8NFZ0 1043 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 GJA10Q969M2 543 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 MBOAT7Q96N66 472 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 TRAIPQ9BWF2 469 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 SCNM1Q9BWG6 230 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 ADAMTS10Q9H324 1103 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 RXFP1Q9HBX9 757 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 RALGAPA1Q6GYQ0 2036 aa9.89□□□□□ -0.83
TRAPPC1-202ENST00000540486 BPTFQ12830 3046 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 NFASCO94856 1347 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 WNT7AO00755 349 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 MSH4O15457 936 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 ATG7O95352 703 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 CCNE2O96020 404 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 VTNP04004 478 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 SKIP12755 728 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 SPINK2P20155 84 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 KRT2P35908 639 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 ACTR2P61160 394 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 ZNF252P-AS1Q0IIN9 211 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 Q4G0T1 1027 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 CEP68Q76N32 757 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 DIS3L2Q8IYB7 885 aaKnown RBP9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 FGF13Q92913 245 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 C8orf76Q96K31 380 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 PPP1R16BQ96T49 567 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 ARRDC1-AS1Q9H2J1 176 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 CHST12Q9NRB3 414 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 DNAJB4Q9UDY4 337 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 FAN1Q9Y2M0 1017 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 WDFY3Q8IZQ1 3526 aa9.88□□□□□ -0.83
TRAPPC1-202ENST00000540486 IGKV6D-21A0A0A0MT36 114 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 CCDC194A0A1B0GVG4 234 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 SHISA7A6NL88 538 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 CHURC1-FNTBB4DL54 471 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 DDX39AO00148 427 aaKnown RBP9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 IPO5O00410 1097 aaKnown RBP9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 C2CD2LO14523 706 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 AXIN1O15169 862 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 PAPSS2O95340 614 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 CEACAM1P13688 526 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 GJB2P29033 226 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 PHKA2P46019 1235 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 FNTBP49356 437 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 NLRP11P59045 1033 aaKnown RBP9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 SWT1Q5T5J6 900 aaKnown RBP9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 FAM160B1Q5W0V3 765 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 RNF43Q68DV7 783 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 PPP4R3AQ6IN85 833 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 MOXD1Q6UVY6 613 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 ABHD15Q6UXT9 468 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 NEK8Q86SG6 692 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 PDZD3Q86UT5 571 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 METTL13Q8N6R0 699 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 FAM184AQ8NB25 1140 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 DNASE1L2Q92874 299 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 SDF4Q9BRK5 362 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 TMEM175Q9BSA9 504 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 ZNF577Q9BSK1 485 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 HERC2P3Q9BVR0 1158 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 LMAN1LQ9HAT1 526 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 HEBP1Q9NRV9 189 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 NEUROG3Q9Y4Z2 214 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 PCDHGA5Q9Y5G8 931 aa9.87□□□□□ -0.83
TRAPPC1-202ENST00000540486 LOC400499M0QZD8 3231 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 MAGEB2O15479 319 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 TGM5O43548 720 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 SLC37A4O43826 429 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 ZNF623O75123 536 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 ECI2O75521 394 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 OFD1O75665 1012 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 PSMD10O75832 226 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 C22orf31O95567 290 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 SPATA31D3P0C874 917 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 MYBP10242 640 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 TMOD1P28289 359 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 HOXA6P31267 233 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 SETQ01105 290 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 SATB1Q01826 763 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 SRSF5Q13243 272 aaKnown RBP9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 TRIM29Q14134 588 aa9.86□□□□□ -0.83
TRAPPC1-202ENST00000540486 ITPR1Q14643 2758 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms