RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 RPP25Q9BUL9 199 aaKnown RBP13.78□□□□□ -0.2
COPS7A-211ENST00000540408 FOXQ1Q9C009 403 aa13.78□□□□□ -0.2
COPS7A-211ENST00000540408 TUFT1Q9NNX1 390 aa13.78□□□□□ -0.2
COPS7A-211ENST00000540408 GPRC5CQ9NQ84 441 aa13.78□□□□□ -0.2
COPS7A-211ENST00000540408 CACNG4Q9UBN1 327 aa13.78□□□□□ -0.2
COPS7A-211ENST00000540408 ARID2Q68CP9 1835 aa13.78□□□□□ -0.2
COPS7A-211ENST00000540408 A0A087WWV3 80 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 POTEMA6NI47 508 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 BTBD18B2RXH4 712 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 ACKR2O00590 384 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 PTGESO14684 152 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 NCAM2O15394 837 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 RECQL4O94761 1208 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 PRKCBP05771 671 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 LIG1P18858 919 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 OR1D2P34982 312 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 MAGEA9P43362 315 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 NTHL1P78549 312 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 RAB33AQ14088 237 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 PUM1Q14671 1186 aaKnown RBP eCLIP13.77□□□□□ -0.21
COPS7A-211ENST00000540408 UBXN2BQ14CS0 331 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 MLF2Q15773 248 aaPredicted RBP13.77□□□□□ -0.21
COPS7A-211ENST00000540408 PABPC1LQ4VXU2 614 aaKnown RBP13.77□□□□□ -0.21
COPS7A-211ENST00000540408 AXDND1Q5T1B0 1012 aaPredicted RBP13.77□□□□□ -0.21
COPS7A-211ENST00000540408 CDCA2Q69YH5 1023 aaPredicted RBP13.77□□□□□ -0.21
COPS7A-211ENST00000540408 POTEGQ6S5H5 508 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 RSPO2Q6UXX9 243 aaPredicted RBP13.77□□□□□ -0.21
COPS7A-211ENST00000540408 CATSPER3Q86XQ3 398 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 NOSTRINQ8IVI9 506 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 DIS3L2Q8IYB7 885 aaKnown RBP13.77□□□□□ -0.21
COPS7A-211ENST00000540408 DEPTORQ8TB45 409 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 MTMR9Q96QG7 549 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 NELL2Q99435 816 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 OSBPL6Q9BZF3 934 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 PDZD7Q9H5P4 517 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 SPATA6Q9NWH7 488 aaPredicted RBP13.77□□□□□ -0.21
COPS7A-211ENST00000540408 FBXO4Q9UKT5 387 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 KCNH3Q9ULD8 1083 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 DMDP11532 3685 aa13.77□□□□□ -0.21
COPS7A-211ENST00000540408 ARHGEF35A5YM69 484 aa13.76□□□□□ -0.21
COPS7A-211ENST00000540408 FAM170BA6NMN3 283 aa13.76□□□□□ -0.21
COPS7A-211ENST00000540408 DTNBO60941 627 aa13.76□□□□□ -0.21
COPS7A-211ENST00000540408 B3GAT3O94766 335 aa13.76□□□□□ -0.21
COPS7A-211ENST00000540408 POU2F2P09086 479 aa13.76□□□□□ -0.21
COPS7A-211ENST00000540408 SPATA31C1P0DKV0 1188 aa13.76□□□□□ -0.21
COPS7A-211ENST00000540408 FDPSP14324 419 aaKnown RBP13.76□□□□□ -0.21
COPS7A-211ENST00000540408 MCM7P33993 719 aa13.76□□□□□ -0.21
COPS7A-211ENST00000540408 NAMPTP43490 491 aa13.76□□□□□ -0.21
COPS7A-211ENST00000540408 RBM25P49756 843 aaKnown RBP13.76□□□□□ -0.21
COPS7A-211ENST00000540408 ANAPC15P60006 121 aa13.76□□□□□ -0.21
COPS7A-211ENST00000540408 SAFBQ15424 915 aaKnown RBP eCLIP13.76□□□□□ -0.21
COPS7A-211ENST00000540408 ZNF528Q3MIS6 628 aa13.76□□□□□ -0.21
COPS7A-211ENST00000540408 DCAF4L1Q3SXM0 396 aa13.76□□□□□ -0.21
COPS7A-211ENST00000540408 ATRIPQ8WXE1 791 aa13.76□□□□□ -0.21
COPS7A-211ENST00000540408 SECISBP2LQ93073 1101 aaKnown RBP13.76□□□□□ -0.21
COPS7A-211ENST00000540408 RMDN1Q96DB5 314 aa13.76□□□□□ -0.21
COPS7A-211ENST00000540408 IFT74Q96LB3 600 aa13.76□□□□□ -0.21
COPS7A-211ENST00000540408 UROC1Q96N76 676 aa13.76□□□□□ -0.21
COPS7A-211ENST00000540408 POLR3CQ9BUI4 534 aaPredicted RBP13.76□□□□□ -0.21
COPS7A-211ENST00000540408 MRPS17Q9Y2R5 130 aaKnown RBP13.76□□□□□ -0.21
COPS7A-211ENST00000540408 GDAQ9Y2T3 454 aa13.76□□□□□ -0.21
COPS7A-211ENST00000540408 MRPS23Q9Y3D9 190 aaKnown RBP13.76□□□□□ -0.21
COPS7A-211ENST00000540408 SPTBN4Q9H254 2564 aa13.76□□□□□ -0.21
COPS7A-211ENST00000540408 DOCK8Q8NF50 2099 aa13.75□□□□□ -0.21
COPS7A-211ENST00000540408 GLULP15104 373 aa13.75□□□□□ -0.21
COPS7A-211ENST00000540408 ELF1P32519 619 aa13.75□□□□□ -0.21
COPS7A-211ENST00000540408 EFNA5P52803 228 aa13.75□□□□□ -0.21
COPS7A-211ENST00000540408 ZBTB41Q5SVQ8 909 aa13.75□□□□□ -0.21
COPS7A-211ENST00000540408 PADI6Q6TGC4 694 aa13.75□□□□□ -0.21
COPS7A-211ENST00000540408 ANKS3Q6ZW76 656 aa13.75□□□□□ -0.21
COPS7A-211ENST00000540408 GPR161Q8N6U8 529 aaKnown RBP13.75□□□□□ -0.21
COPS7A-211ENST00000540408 NECAB1Q8N987 351 aa13.75□□□□□ -0.21
COPS7A-211ENST00000540408 ITFG1Q8TB96 612 aa13.75□□□□□ -0.21
COPS7A-211ENST00000540408 KXD1Q9BQD3 176 aa13.75□□□□□ -0.21
COPS7A-211ENST00000540408 DDX23Q9BUQ8 820 aaKnown RBP13.75□□□□□ -0.21
COPS7A-211ENST00000540408 NCDNQ9UBB6 729 aa13.75□□□□□ -0.21
COPS7A-211ENST00000540408 CDY1Q9Y6F8 540 aa13.75□□□□□ -0.21
COPS7A-211ENST00000540408 VPS13AQ96RL7 3174 aa13.75□□□□□ -0.21
COPS7A-211ENST00000540408 TMEM189-UBE2V1I3L0A0 370 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 SPTLC1O15269 473 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 ADAM12O43184 909 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 LRRN2O75325 713 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 MED24O75448 989 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 LRG1P02750 347 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 PTPN2P17706 415 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 CYP11B2P19099 503 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 SDHBP21912 280 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 FGFR3P22607 806 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 RPA1P27694 616 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 YARSP54577 528 aaKnown RBP13.74□□□□□ -0.21
COPS7A-211ENST00000540408 CSTF1Q05048 431 aaKnown RBP13.74□□□□□ -0.21
COPS7A-211ENST00000540408 NAB2Q15742 525 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 ATF7IP2Q5U623 682 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 GTF3C6Q969F1 213 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 GDE1Q9NZC3 331 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 DNMT3BQ9UBC3 853 aaKnown RBP13.74□□□□□ -0.21
COPS7A-211ENST00000540408 MTRRQ9UBK8 725 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 PCDHGA2Q9Y5H1 932 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 BACE2Q9Y5Z0 518 aa13.74□□□□□ -0.21
COPS7A-211ENST00000540408 TTLL13PA6NNM8 815 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms