RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 SCAF8Q9UPN6 1271 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 ADAMTSL1Q8N6G6 1762 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 BAZ2AQ9UIF9 1905 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 TCP10L2B9ZVM9 353 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 BTBD19C9JJ37 291 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 PSMA7O14818 248 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 BIRC5O15392 142 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 GRIN3BO60391 1043 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 OR6B1O95007 311 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 CREB1P16220 341 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 RASSF2P50749 326 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 ITGA7Q13683 1181 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 MTFR1Q15390 333 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 TDRD12Q587J7 1177 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 ACSBG2Q5FVE4 666 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 MYOCDQ8IZQ8 938 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 ANKRD42Q8N9B4 389 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 ZBED3Q96IU2 234 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 SNX27Q96L92 541 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 LRRC37BQ96QE4 947 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 ZKSCAN3Q9BRR0 538 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 TLE6Q9H808 572 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 SIK3Q9Y2K2 1263 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 SSU72P8A0A1W2PR75 194 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 DDTLA6NHG4 134 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 EIF3FO00303 357 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 TRAFD1O14545 582 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 PSMG1O95456 288 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 CBX6O95503 412 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 GRIA2P42262 883 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 HALP42357 657 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 CLCN2P51788 898 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 MKRN3Q13064 507 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 SMUG1Q53HV7 270 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 SH3BP5LQ7L8J4 393 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 CROCCP2Q86T23 111 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 NELFCDQ8IXH7 590 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 DQX1Q8TE96 717 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 GAB3Q8WWW8 586 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 ANKS1AQ92625 1134 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 TCHPQ9BT92 498 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 CNNM2Q9H8M5 875 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 METTL14Q9HCE5 456 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 ZDHHC18Q9NUE0 388 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 TBCCD1Q9NVR7 557 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 TUBA8Q9NY65 449 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 WNT7AO00755 349 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 RASGRF2O14827 1237 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 GH1P01241 217 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 IFNAR1P17181 557 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 NFKBIAP25963 317 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 RGS2P41220 211 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 EPS15P42566 896 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 USP11P51784 963 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 YARSP54577 528 aaKnown RBP10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 PTPROQ16827 1216 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 SPDYE2Q495Y8 402 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 VWA3BQ502W6 1294 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 EAPPQ56P03 285 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 FAM47AQ5JRC9 791 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 HGSNATQ68CP4 663 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 SLC2A7Q6PXP3 512 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 VSTM1Q6UX27 236 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 BTNL9Q6UXG8 535 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 TRIM67Q6ZTA4 783 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 OTUD6AQ7L8S5 288 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 SATL1Q86VE3 508 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 TREML1Q86YW5 311 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 IQCF2Q8IXL9 164 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 CCDC65Q8IXS2 484 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 BAP1Q92560 729 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 MAML3Q96JK9 1138 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 TMEM109Q9BVC6 243 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 GOLPH3Q9H4A6 298 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 MMRN2Q9H8L6 949 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 FAIMQ9NVQ4 179 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 STX18Q9P2W9 335 aaKnown RBP10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 UMODL1Q5DID0 1318 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 PSME4Q14997 1843 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 ASTN2O75129 1339 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 SMIM31A0A1B0GVY4 71 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 FAM196BA6NMK8 535 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 WDR46O15213 610 aaKnown RBP10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 RNASEH1O60930 286 aaKnown RBP10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 PTPN4P29074 926 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 KLRC3Q07444 240 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 DCTN2Q13561 401 aaKnown RBP10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 LRRC8BQ6P9F7 803 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 METTL13Q8N6R0 699 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 ESR2Q92731 530 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 ARHGEF2Q92974 986 aaKnown RBP10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 GRAMD1AQ96CP6 724 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 MIPEPQ99797 713 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 SEMA4AQ9H3S1 761 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 MKNK2Q9HBH9 465 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 NLRC4Q9NPP4 1024 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 GPRC5DQ9NZD1 345 aa10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 KIAA1522Q9P206 1035 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-243ENST00000540387 ZNF212Q9UDV6 495 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms