RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SLC51AQ86UW1 340 aa19.83■□□□□ 0.77
SFSWAP-207ENST00000538548 LRRC8CQ8TDW0 803 aa19.83■□□□□ 0.77
SFSWAP-207ENST00000538548 TRAPPC9Q96Q05 1148 aa19.83■□□□□ 0.77
SFSWAP-207ENST00000538548 PAIP2Q9BPZ3 127 aaKnown RBP19.83■□□□□ 0.77
SFSWAP-207ENST00000538548 TRAIPQ9BWF2 469 aa19.83■□□□□ 0.77
SFSWAP-207ENST00000538548 GLT8D2Q9H1C3 349 aa19.83■□□□□ 0.77
SFSWAP-207ENST00000538548 DNAJC17Q9NVM6 304 aaKnown RBP19.83■□□□□ 0.77
SFSWAP-207ENST00000538548 SCOCQ9UIL1 159 aa19.83■□□□□ 0.77
SFSWAP-207ENST00000538548 FSCN2O14926 492 aa19.83■□□□□ 0.76
SFSWAP-207ENST00000538548 ZBTB5O15062 677 aa19.83■□□□□ 0.76
SFSWAP-207ENST00000538548 GSTA2P09210 222 aa19.83■□□□□ 0.76
SFSWAP-207ENST00000538548 PTPN4P29074 926 aa19.83■□□□□ 0.76
SFSWAP-207ENST00000538548 MAN1A1P33908 653 aa19.83■□□□□ 0.76
SFSWAP-207ENST00000538548 RIBC1Q8N443 379 aaPredicted RBP19.83■□□□□ 0.76
SFSWAP-207ENST00000538548 ETNPPLQ8TBG4 499 aa19.83■□□□□ 0.76
SFSWAP-207ENST00000538548 C1orf54Q8WWF1 131 aa19.83■□□□□ 0.76
SFSWAP-207ENST00000538548 PLVAPQ9BX97 442 aa19.83■□□□□ 0.76
SFSWAP-207ENST00000538548 BHMT2Q9H2M3 363 aa19.83■□□□□ 0.76
SFSWAP-207ENST00000538548 BCAS3Q9H6U6 928 aa19.83■□□□□ 0.76
SFSWAP-207ENST00000538548 STK24Q9Y6E0 443 aa19.83■□□□□ 0.76
SFSWAP-207ENST00000538548 CBX6O95503 412 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 TRIM49P0CI25 452 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 TRIM49CP0CI26 452 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 KIFAP3Q92845 792 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 TRIM4Q9C037 500 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 FRMD4BQ9Y2L6 1034 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 A0A1W2PRG0 241 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 SIGLEC16A6NMB1 481 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 USP17L15C9J2P7 530 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 USP17L13C9JLJ4 530 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 USP17L11C9JVI0 530 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 USP17L18D6R9N7 530 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 USP17L22D6RA61 530 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 USP17L17D6RBQ6 530 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 USP17L19D6RCP7 530 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 USP17L20D6RJB6 530 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 CLDN3O15551 220 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 SORBS3O60504 671 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 HNRNPCL1O60812 293 aaKnown RBP19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 USP17L24Q0WX57 530 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 SLC15A2Q16348 729 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 RNF220Q5VTB9 566 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 USP17L6PQ6QN14 398 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 ANO3Q9BYT9 981 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 IKZF4Q9H2S9 585 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 UBN1Q9NPG3 1134 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 CHORDC1Q9UHD1 332 aaPredicted RBP19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 LNPEPQ9UIQ6 1025 aa19.82■□□□□ 0.76
SFSWAP-207ENST00000538548 EDF1O60869 148 aaKnown RBP19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 MUTP22033 750 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 SSR1P43307 286 aaKnown RBP19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 NR1H3Q13133 447 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 SPARCL1Q14515 664 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 TBC1D9BQ66K14 1250 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 RPUSD2Q8IZ73 545 aaKnown RBP19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 DRAXINQ8NBI3 349 aaPredicted RBP19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 ZNF564Q8TBZ8 553 aaPredicted RBP19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 C10orf82Q8WW14 230 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 VTI1AQ96AJ9 217 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 RGL1Q9NZL6 768 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 ANAPC5Q9UJX4 755 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 TBX3O15119 743 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 GAS8O95995 478 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 SKIP12755 728 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 ATF2P15336 505 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 SLC18A1P54219 525 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 OCRLQ01968 901 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 ZNF804AQ7Z570 1209 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 UCMAQ8WVF2 138 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 MAML1Q92585 1016 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 SLCO1B3Q9NPD5 702 aa19.81■□□□□ 0.76
SFSWAP-207ENST00000538548 GZMAP12544 262 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 SLC45A4Q5BKX6 768 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 C4orf50Q6ZRC1 276 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 HS2ST1Q7LGA3 356 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 RELL1Q8IUW5 271 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 LMO3Q8TAP4 145 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 DENND1AQ8TEH3 1009 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 GRK7Q8WTQ7 553 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 SPOCK2Q92563 424 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 SAR1AQ9NR31 198 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 PRPF4O43172 522 aaKnown RBP eCLIP19.8■□□□□ 0.769e-7■■■□□ 15.4
SFSWAP-207ENST00000538548 LAMB3Q13751 1172 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 TMED2Q15363 201 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 CCDC6Q16204 474 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 PDK4Q16654 411 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 TTBK2Q6IQ55 1244 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 ZNF746Q6NUN9 644 aaPredicted RBP19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 CPNE8Q86YQ8 564 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 PSPC1Q8WXF1 523 aaKnown RBP19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 NUP85Q9BW27 656 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 RABGAP1Q9Y3P9 1069 aa19.8■□□□□ 0.76
SFSWAP-207ENST00000538548 ATMINO43313 823 aaPredicted RBP19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 NMT1P30419 496 aaKnown RBP19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 EIF6P56537 245 aaKnown RBP19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 COG2Q14746 738 aa19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 KHDC1Q4VXA5 237 aaKnown RBP19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 PRR16Q569H4 304 aa19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 TRABD2AQ86V40 505 aa19.79■□□□□ 0.76
SFSWAP-207ENST00000538548 BICD1Q96G01 975 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms