RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 NPTX2P47972 431 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 SLC12A3P55017 1021 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 RBP5P82980 135 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 FKBP3Q00688 224 aaKnown RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 MYL7Q01449 175 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 LPIN1Q14693 890 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 KARSQ15046 597 aaKnown RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 TMEM240Q5SV17 173 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 ZNF658Q5TYW1 1059 aaPredicted RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 CCDC70Q6NSX1 233 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 DCLRE1AQ6PJP8 1040 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 CCDC149Q6ZUS6 474 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 ZNF365Q70YC5 407 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 ECHDC2Q86YB7 292 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 TMEM86AQ8N2M4 240 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 DBF4BQ8NFT6 615 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 POMGNT1Q8WZA1 660 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 TIFAQ96CG3 184 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 PURBQ96QR8 312 aaKnown RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 FDXACB1Q9BRP7 624 aaPredicted RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 TRMT13Q9NUP7 481 aaKnown RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 FAM105AQ9NUU6 356 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 TBX20Q9UMR3 447 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 FAN1Q9Y2M0 1017 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 PLXNA1Q9UIW2 1896 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 LOXHD1Q8IVV2 1947 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 SF3B1O75533 1304 aaKnown RBP eCLIP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 ADGRA3Q8IWK6 1321 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 A0A1B0GUA9 196 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 SOBPA7XYQ1 873 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 E9PMD0 336 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 H0YGN5 161 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 TMEM189-UBE2V1I3L0A0 370 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 EXOC3O60645 756 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 ZC3H11AO75152 810 aaKnown RBP eCLIP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 HOXB8P17481 243 aaPredicted RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 GLRA2P23416 452 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 PCSK1P29120 753 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 ELF1P32519 619 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 CCL23P55773 120 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 GSCP56915 257 aaPredicted RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 BPIFB4P59827 614 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 MCL1Q07820 350 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 TUSC3Q13454 348 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 MCM6Q14566 821 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 SMC1AQ14683 1233 aaKnown RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 KNOP1Q1ED39 458 aaKnown RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 KIZQ2M2Z5 673 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 CCDC40Q4G0X9 1142 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 C11orf96Q7Z7L8 435 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 TRIM50Q86XT4 487 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 CCDC26Q8TAB7 109 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 PIGOQ8TEQ8 1089 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 STAMQ92783 540 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 TOP1MTQ969P6 601 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 NECTIN4Q96NY8 510 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 GCNAQ96QF7 691 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 OSMRQ99650 979 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 DUSP9Q99956 384 aaKnown RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 ADAMTS10Q9H324 1103 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 CLSTN2Q9H4D0 955 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 LUC7LQ9NQ29 371 aaKnown RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 AGO2Q9UKV8 859 aaKnown RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 ITGA11Q9UKX5 1188 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 RABL2BQ9UNT1 228 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 HPSEQ9Y251 543 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 PCDHGA4Q9Y5G9 962 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 FRMD3A2A2Y4 597 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 OR6C75A6NL08 312 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 ENPP3O14638 875 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 PRPF6O94906 941 aaKnown RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 GJB5O95377 273 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 NPTXRO95502 500 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 ODC1P11926 461 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 TYMPP19971 482 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 CCNE1P24864 410 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 CD52P31358 61 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 ABL2P42684 1182 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 TSPY1Q01534 308 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 COASYQ13057 564 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 CAPSQ13938 189 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 DSC3Q14574 896 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 NFE2Q16621 373 aaPredicted RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 DUOXA2Q1HG44 320 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 PPP2R2DQ66LE6 453 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 TTC19Q6DKK2 380 aaPredicted RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 ANKS3Q6ZW76 656 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 DEFB128Q7Z7B8 93 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 THNSL1Q8IYQ7 743 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 LRRC52Q8N7C0 313 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 PDILTQ8N807 584 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 ARL10Q8N8L6 244 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 ZNF507Q8TCN5 953 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 DIS3LQ8TF46 1054 aaKnown RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 CASP10Q92851 521 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 TMEM143Q96AN5 459 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 POP1Q99575 1024 aaKnown RBP3.87□□□□□ -1.79
PTPN22-211ENST00000538253 SLC24A3Q9HC58 644 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 LCMT1Q9UIC8 334 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 KIAA1257Q9ULG3 409 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms