RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 PLCG1P19174 1290 aa23.51■■□□□ 1.35
CCDC78-215ENST00000538176 ZNF131P52739 623 aa23.51■■□□□ 1.35
CCDC78-215ENST00000538176 NCKAP1LP55160 1127 aa23.51■■□□□ 1.35
CCDC78-215ENST00000538176 KARSQ15046 597 aaKnown RBP23.51■■□□□ 1.35
CCDC78-215ENST00000538176 NAB2Q15742 525 aa23.51■■□□□ 1.35
CCDC78-215ENST00000538176 KYAT1Q16773 422 aa23.51■■□□□ 1.35
CCDC78-215ENST00000538176 DCLRE1AQ6PJP8 1040 aa23.51■■□□□ 1.35
CCDC78-215ENST00000538176 ALKAL1Q6UXT8 129 aa23.51■■□□□ 1.35
CCDC78-215ENST00000538176 C15orf39Q6ZRI6 1047 aa23.51■■□□□ 1.35
CCDC78-215ENST00000538176 HSCBQ8IWL3 235 aa23.51■■□□□ 1.35
CCDC78-215ENST00000538176 PPP1R10Q96QC0 940 aaKnown RBP23.51■■□□□ 1.35
CCDC78-215ENST00000538176 LRFN3Q9BTN0 628 aa23.51■■□□□ 1.35
CCDC78-215ENST00000538176 RHOBTB2Q9BYZ6 727 aa23.51■■□□□ 1.35
CCDC78-215ENST00000538176 PLEKHA4Q9H4M7 779 aa23.51■■□□□ 1.35
CCDC78-215ENST00000538176 BLOC1S4Q9NUP1 217 aa23.51■■□□□ 1.35
CCDC78-215ENST00000538176 CASTOR2A6NHX0 329 aa23.5■■□□□ 1.35
CCDC78-215ENST00000538176 CLDN3O15551 220 aa23.5■■□□□ 1.35
CCDC78-215ENST00000538176 FAM13AO94988 1023 aa23.5■■□□□ 1.35
CCDC78-215ENST00000538176 GLUD1P00367 558 aa23.5■■□□□ 1.35
CCDC78-215ENST00000538176 SLC39A14Q15043 492 aa23.5■■□□□ 1.35
CCDC78-215ENST00000538176 RARS2Q5T160 578 aaKnown RBP23.5■■□□□ 1.35
CCDC78-215ENST00000538176 HAUS6Q7Z4H7 955 aa23.5■■□□□ 1.35
CCDC78-215ENST00000538176 MYCT1Q8N699 235 aa23.5■■□□□ 1.35
CCDC78-215ENST00000538176 CMASQ8NFW8 434 aaPredicted RBP23.5■■□□□ 1.35
CCDC78-215ENST00000538176 REEP2Q9BRK0 252 aa23.5■■□□□ 1.35
CCDC78-215ENST00000538176 TTPALQ9BTX7 342 aa23.5■■□□□ 1.35
CCDC78-215ENST00000538176 APOL5Q9BWW9 433 aa23.5■■□□□ 1.35
CCDC78-215ENST00000538176 FBXO2Q9UK22 296 aaPredicted RBP23.5■■□□□ 1.35
CCDC78-215ENST00000538176 USTQ9Y2C2 406 aa23.5■■□□□ 1.35
CCDC78-215ENST00000538176 SMIM28A0A1B0GU29 152 aa23.49■■□□□ 1.35
CCDC78-215ENST00000538176 TRAK2O60296 914 aa23.49■■□□□ 1.35
CCDC78-215ENST00000538176 HSP90AA1P07900 732 aaKnown RBP23.49■■□□□ 1.35
CCDC78-215ENST00000538176 COL9A1P20849 921 aa23.49■■□□□ 1.35
CCDC78-215ENST00000538176 MARCKSP29966 332 aaPredicted RBP23.49■■□□□ 1.35
CCDC78-215ENST00000538176 GRIN1Q05586 938 aa23.49■■□□□ 1.35
CCDC78-215ENST00000538176 DHX8Q14562 1220 aaKnown RBP23.49■■□□□ 1.35
CCDC78-215ENST00000538176 GPR149Q86SP6 731 aa23.49■■□□□ 1.35
CCDC78-215ENST00000538176 PLCD3Q8N3E9 789 aa23.49■■□□□ 1.35
CCDC78-215ENST00000538176 KRI1Q8N9T8 703 aaKnown RBP23.49■■□□□ 1.35
CCDC78-215ENST00000538176 RIN2Q8WYP3 895 aaPredicted RBP23.49■■□□□ 1.35
CCDC78-215ENST00000538176 ABLIM1O14639 778 aa23.48■■□□□ 1.35
CCDC78-215ENST00000538176 TBCAO75347 108 aaKnown RBP23.48■■□□□ 1.35
CCDC78-215ENST00000538176 KCNE1P15382 129 aa23.48■■□□□ 1.35
CCDC78-215ENST00000538176 MCL1Q07820 350 aa23.48■■□□□ 1.35
CCDC78-215ENST00000538176 MCM6Q14566 821 aa23.48■■□□□ 1.35
CCDC78-215ENST00000538176 NOLC1Q14978 699 aaKnown RBP eCLIP23.48■■□□□ 1.35
CCDC78-215ENST00000538176 RRAGBQ5VZM2 374 aa23.48■■□□□ 1.35
CCDC78-215ENST00000538176 ZBTB33Q86T24 672 aa23.48■■□□□ 1.35
CCDC78-215ENST00000538176 EDAQ92838 391 aa23.48■■□□□ 1.35
CCDC78-215ENST00000538176 EPSTI1Q96J88 318 aa23.48■■□□□ 1.35
CCDC78-215ENST00000538176 ZNF396Q96N95 335 aaPredicted RBP23.48■■□□□ 1.35
CCDC78-215ENST00000538176 TSPAN18Q96SJ8 248 aa23.48■■□□□ 1.35
CCDC78-215ENST00000538176 PAAF1Q9BRP4 392 aa23.48■■□□□ 1.35
CCDC78-215ENST00000538176 PLEKHA5Q9HAU0 1116 aa23.48■■□□□ 1.35
CCDC78-215ENST00000538176 GTF3C3Q9Y5Q9 886 aa23.48■■□□□ 1.35
CCDC78-215ENST00000538176 C5orf42Q9H799 3197 aa23.48■■□□□ 1.35
CCDC78-215ENST00000538176 NPHP3-ACAD11A0A0J9YXS1 232 aa23.47■■□□□ 1.35
CCDC78-215ENST00000538176 F8W810 466 aa23.47■■□□□ 1.35
CCDC78-215ENST00000538176 B3GAT3O94766 335 aa23.47■■□□□ 1.35
CCDC78-215ENST00000538176 KIF4AO95239 1232 aa23.47■■□□□ 1.35
CCDC78-215ENST00000538176 RPL9P32969 192 aaKnown RBP23.47■■□□□ 1.35
CCDC78-215ENST00000538176 UPP1Q16831 310 aa23.47■■□□□ 1.35
CCDC78-215ENST00000538176 FAM171A1Q5VUB5 890 aa23.47■■□□□ 1.35
CCDC78-215ENST00000538176 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.47■■□□□ 1.35
CCDC78-215ENST00000538176 CCDC73Q6ZRK6 1079 aa23.47■■□□□ 1.35
CCDC78-215ENST00000538176 PIK3R5Q8WYR1 880 aa23.47■■□□□ 1.35
CCDC78-215ENST00000538176 BICD1Q96G01 975 aa23.47■■□□□ 1.35
CCDC78-215ENST00000538176 FOXD4L1Q9NU39 408 aa23.47■■□□□ 1.35
CCDC78-215ENST00000538176 CNTN3Q9P232 1028 aa23.47■■□□□ 1.35
CCDC78-215ENST00000538176 MUTYHQ9UIF7 546 aa23.47■■□□□ 1.35
CCDC78-215ENST00000538176 ARIH1Q9Y4X5 557 aaPredicted RBP23.47■■□□□ 1.35
CCDC78-215ENST00000538176 NASPP49321 788 aaPredicted RBP23.46■■□□□ 1.35
CCDC78-215ENST00000538176 OSTNP61366 133 aa23.46■■□□□ 1.35
CCDC78-215ENST00000538176 CEBPZQ03701 1054 aaKnown RBP23.46■■□□□ 1.35
CCDC78-215ENST00000538176 TMC5Q6UXY8 1006 aa23.46■■□□□ 1.35
CCDC78-215ENST00000538176 SV2BQ7L1I2 683 aa23.46■■□□□ 1.35
CCDC78-215ENST00000538176 C12orf76Q8N812 135 aaPredicted RBP23.46■■□□□ 1.35
CCDC78-215ENST00000538176 CEP120Q8N960 986 aa23.46■■□□□ 1.35
CCDC78-215ENST00000538176 RABGGTAQ92696 567 aa23.46■■□□□ 1.35
CCDC78-215ENST00000538176 SNX27Q96L92 541 aa23.46■■□□□ 1.35
CCDC78-215ENST00000538176 USP28Q96RU2 1077 aa23.46■■□□□ 1.35
CCDC78-215ENST00000538176 ST6GALNAC4Q9H4F1 302 aa23.46■■□□□ 1.35
CCDC78-215ENST00000538176 POMKQ9H5K3 350 aa23.46■■□□□ 1.35
CCDC78-215ENST00000538176 C11orf16Q9NQ32 467 aa23.46■■□□□ 1.35
CCDC78-215ENST00000538176 MAN1C1Q9NR34 630 aa23.46■■□□□ 1.35
CCDC78-215ENST00000538176 ANKFY1Q9P2R3 1169 aa23.46■■□□□ 1.35
CCDC78-215ENST00000538176 TBX20Q9UMR3 447 aa23.46■■□□□ 1.35
CCDC78-215ENST00000538176 PIGRP01833 764 aa23.45■■□□□ 1.34
CCDC78-215ENST00000538176 CLTAP09496 248 aa23.45■■□□□ 1.34
CCDC78-215ENST00000538176 MATR3P43243 847 aaKnown RBP eCLIP23.45■■□□□ 1.34
CCDC78-215ENST00000538176 LIG4P49917 911 aa23.45■■□□□ 1.34
CCDC78-215ENST00000538176 CLCNKBP51801 687 aa23.45■■□□□ 1.34
CCDC78-215ENST00000538176 CACNB1Q02641 598 aaPredicted RBP23.45■■□□□ 1.34
CCDC78-215ENST00000538176 GLRA4Q5JXX5 417 aa23.45■■□□□ 1.34
CCDC78-215ENST00000538176 FAM173BQ6P4H8 233 aa23.45■■□□□ 1.34
CCDC78-215ENST00000538176 CEP57Q86XR8 500 aa23.45■■□□□ 1.34
CCDC78-215ENST00000538176 ACSF2Q96CM8 615 aaPredicted RBP23.45■■□□□ 1.34
CCDC78-215ENST00000538176 ZBTB45Q96K62 511 aaPredicted RBP23.45■■□□□ 1.34
CCDC78-215ENST00000538176 ZHX3Q9H4I2 956 aa23.45■■□□□ 1.34
CCDC78-215ENST00000538176 ZDHHC7Q9NXF8 308 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms