RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 KLHL4Q9C0H6 718 aa9.05□□□□□ -0.96
SRGAP1-202ENST00000537556 Q9H521 79 aa9.05□□□□□ -0.96
SRGAP1-202ENST00000537556 GID8Q9NWU2 228 aa9.05□□□□□ -0.96
SRGAP1-202ENST00000537556 SATB2Q9UPW6 733 aa9.05□□□□□ -0.96
SRGAP1-202ENST00000537556 NOX1Q9Y5S8 564 aa9.05□□□□□ -0.96
SRGAP1-202ENST00000537556 CCDC61Q9Y6R9 512 aa9.05□□□□□ -0.96
SRGAP1-202ENST00000537556 ECM29Q5VYK3 1845 aa9.05□□□□□ -0.96
SRGAP1-202ENST00000537556 IGSF1Q8N6C5 1336 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 A0A1W2PRG0 241 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 ADCY6O43306 1168 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 BAIAP3O94812 1187 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 APOEP02649 317 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 MUTP22033 750 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 SLC5A2P31639 672 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 VCPP55072 806 aaKnown RBP9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 RASGRF1Q13972 1273 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 RRP1BQ14684 758 aaKnown RBP9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 SLFN11Q7Z7L1 901 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 CABP7Q86V35 215 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 VPS36Q86VN1 386 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 BPHLQ86WA6 291 aaPredicted RBP9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 GPIHBP1Q8IV16 184 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 TPCN2Q8NHX9 752 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 CCDC110Q8TBZ0 833 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 U2AF1L4Q8WU68 220 aaKnown RBP9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 EME1Q96AY2 570 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 PTCD3Q96EY7 689 aaKnown RBP9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 FAM161BQ96MY7 647 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 CCDC85AQ96PX6 553 aaPredicted RBP9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 CRAMP1Q96RY5 1269 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 GIN1Q9NXP7 522 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 TAS2R1Q9NYW7 299 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 GRHL1Q9NZI5 618 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 AMFRQ9UKV5 643 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 USP31Q70CQ4 1352 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 SLIT1O75093 1534 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 A0A088AWK7 358 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 C15orf38-AP3S2A0A0A6YYH1 394 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 CFAP69A5D8W1 941 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 TRIM64CA6NLI5 447 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 TNFRSF10AO00220 468 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 TXNDC9O14530 226 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 FOXP2O15409 715 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 KLRC4O43908 158 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 PARNO95453 639 aaKnown RBP9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 SMIM18P0DKX4 95 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 HSPA6P17066 643 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 PCSK6P29122 969 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 CHRNA3P32297 505 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 CETN2P41208 172 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 FAM83BQ5T0W9 1011 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 NIPAL1Q6NVV3 410 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 MIER3Q7Z3K6 550 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 ARPINQ7Z6K5 226 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 C14orf80Q86SX3 495 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 SLC7A5P1Q8MH63 180 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 SRBD1Q8N5C6 995 aaKnown RBP9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 TMCO5AQ8N6Q1 288 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 ZNF713Q8N859 430 aaPredicted RBP9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 SCFD1Q8WVM8 642 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 GLG1Q92896 1179 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 CYTH2Q99418 400 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 CCDC77Q9BR77 488 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 PACSIN1Q9BY11 444 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 UBN1Q9NPG3 1134 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 DISC1Q9NRI5 854 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 LZTS1Q9Y250 596 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 RABGAP1Q9Y3P9 1069 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 SNX9Q9Y5X1 595 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 NID2Q14112 1375 aa9.04□□□□□ -0.96
SRGAP1-202ENST00000537556 TTC34A8MYJ7 566 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 PIK3CDO00329 1044 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 WASLO00401 505 aaPredicted RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 BUD23O43709 281 aaKnown RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 ZBED4O75132 1171 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 CDH16O75309 829 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 TCEA3O75764 348 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 AMPD1P23109 780 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 PHKA2P46019 1235 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 NR1H2P55055 460 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 ACTR3P61158 418 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 NOP14P78316 857 aaKnown RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 NR1D2Q14995 579 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 ARL6IP4Q66PJ3 421 aaKnown RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 ZNF410Q86VK4 478 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 SRRM1Q8IYB3 904 aaKnown RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 SLC43A3Q8NBI5 491 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 RIN3Q8TB24 985 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 APPBP2Q92624 585 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 HES6Q96HZ4 224 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 EYA1Q99502 592 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 GPATCH1Q9BRR8 931 aaKnown RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 MRPL1Q9BYD6 325 aaKnown RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 TRIM55Q9BYV6 548 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 GPR108Q9NPR9 543 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 MYH4Q9Y623 1939 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 B4E1Z4 1266 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 MCF2LO15068 1137 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 TLR2O60603 784 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms